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- # Copyright The Lightning team.
- #
- # Licensed under the Apache License, Version 2.0 (the "License");
- # you may not use this file except in compliance with the License.
- # You may obtain a copy of the License at
- #
- # http://www.apache.org/licenses/LICENSE-2.0
- #
- # Unless required by applicable law or agreed to in writing, software
- # distributed under the License is distributed on an "AS IS" BASIS,
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- # See the License for the specific language governing permissions and
- # limitations under the License.
- from collections.abc import Sequence
- from typing import Any, List, Optional, Union
- from torch import Tensor, tensor
- from typing_extensions import Literal
- from torchmetrics.functional.image.sam import _sam_compute, _sam_update
- from torchmetrics.metric import Metric
- from torchmetrics.utilities import rank_zero_warn
- from torchmetrics.utilities.data import dim_zero_cat
- from torchmetrics.utilities.imports import _MATPLOTLIB_AVAILABLE
- from torchmetrics.utilities.plot import _AX_TYPE, _PLOT_OUT_TYPE
- if not _MATPLOTLIB_AVAILABLE:
- __doctest_skip__ = ["SpectralAngleMapper.plot"]
- class SpectralAngleMapper(Metric):
- """`Spectral Angle Mapper`_ determines the spectral similarity between image spectra and reference spectra.
- It works by calculating the angle between the spectra, where small angles between indicate high similarity and
- high angles indicate low similarity.
- As input to ``forward`` and ``update`` the metric accepts the following input
- - ``preds`` (:class:`~torch.Tensor`): Predictions from model of shape ``(N,C,H,W)``
- - ``target`` (:class:`~torch.Tensor`): Ground truth values of shape ``(N,C,H,W)``
- As output of `forward` and `compute` the metric returns the following output
- - ``sam`` (:class:`~torch.Tensor`): if ``reduction!='none'`` returns float scalar tensor with average SAM value
- over sample else returns tensor of shape ``(N,)`` with SAM values per sample
- Args:
- reduction: a method to reduce metric score over labels.
- - ``'elementwise_mean'``: takes the mean (default)
- - ``'sum'``: takes the sum
- - ``'none'`` or ``None``: no reduction will be applied
- kwargs: Additional keyword arguments, see :ref:`Metric kwargs` for more info.
- Return:
- Tensor with SpectralAngleMapper score
- Example:
- >>> from torch import rand
- >>> from torchmetrics.image import SpectralAngleMapper
- >>> preds = rand([16, 3, 16, 16])
- >>> target = rand([16, 3, 16, 16])
- >>> sam = SpectralAngleMapper()
- >>> sam(preds, target)
- tensor(0.5914)
- """
- higher_is_better: bool = False
- is_differentiable: bool = True
- full_state_update: bool = False
- plot_lower_bound: float = 0.0
- plot_upper_bound: float = 1.0
- preds: List[Tensor]
- target: List[Tensor]
- sum_sam: Tensor
- numel: Tensor
- def __init__(
- self,
- reduction: Optional[Literal["elementwise_mean", "sum", "none"]] = "elementwise_mean",
- **kwargs: Any,
- ) -> None:
- super().__init__(**kwargs)
- if reduction not in ("elementwise_mean", "sum", "none", None):
- raise ValueError(
- f"The `reduction` {reduction} is not valid. Valid options are `elementwise_mean`, `sum`, `none`, None."
- )
- if reduction == "none" or reduction is None:
- rank_zero_warn(
- "Metric `SpectralAngleMapper` will save all targets and predictions in the buffer when using"
- "`reduction=None` or `reduction='none'. For large datasets, this may lead to a large memory footprint."
- )
- self.add_state("preds", default=[], dist_reduce_fx="cat")
- self.add_state("target", default=[], dist_reduce_fx="cat")
- else:
- self.add_state("sum_sam", tensor(0.0), dist_reduce_fx="sum")
- self.add_state("numel", tensor(0), dist_reduce_fx="sum")
- self.reduction = reduction
- def update(self, preds: Tensor, target: Tensor) -> None:
- """Update state with predictions and targets."""
- preds, target = _sam_update(preds, target)
- if self.reduction == "none" or self.reduction is None:
- self.preds.append(preds)
- self.target.append(target)
- else:
- sam_score = _sam_compute(preds, target, reduction="sum")
- self.sum_sam += sam_score
- p_shape = preds.shape
- self.numel += p_shape[0] * p_shape[2] * p_shape[3]
- def compute(self) -> Tensor:
- """Compute spectra over state."""
- if self.reduction == "none" or self.reduction is None:
- preds = dim_zero_cat(self.preds)
- target = dim_zero_cat(self.target)
- return _sam_compute(preds, target, self.reduction)
- return self.sum_sam / self.numel if self.reduction == "elementwise_mean" else self.sum_sam
- def plot(
- self, val: Optional[Union[Tensor, Sequence[Tensor]]] = None, ax: Optional[_AX_TYPE] = None
- ) -> _PLOT_OUT_TYPE:
- """Plot a single or multiple values from the metric.
- Args:
- val: Either a single result from calling `metric.forward` or `metric.compute` or a list of these results.
- If no value is provided, will automatically call `metric.compute` and plot that result.
- ax: An matplotlib axis object. If provided will add plot to that axis
- Returns:
- Figure and Axes object
- Raises:
- ModuleNotFoundError:
- If `matplotlib` is not installed
- .. plot::
- :scale: 75
- >>> # Example plotting single value
- >>> from torch import rand
- >>> from torchmetrics.image import SpectralAngleMapper
- >>> preds = rand([16, 3, 16, 16])
- >>> target = rand([16, 3, 16, 16])
- >>> metric = SpectralAngleMapper()
- >>> metric.update(preds, target)
- >>> fig_, ax_ = metric.plot()
- .. plot::
- :scale: 75
- >>> # Example plotting multiple values
- >>> from torch import rand
- >>> from torchmetrics.image import SpectralAngleMapper
- >>> preds = rand([16, 3, 16, 16])
- >>> target = rand([16, 3, 16, 16])
- >>> metric = SpectralAngleMapper()
- >>> values = [ ]
- >>> for _ in range(10):
- ... values.append(metric(preds, target))
- >>> fig_, ax_ = metric.plot(values)
- """
- return self._plot(val, ax)
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