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- # Copyright The Lightning team.
- #
- # Licensed under the Apache License, Version 2.0 (the "License");
- # you may not use this file except in compliance with the License.
- # You may obtain a copy of the License at
- #
- # http://www.apache.org/licenses/LICENSE-2.0
- #
- # Unless required by applicable law or agreed to in writing, software
- # distributed under the License is distributed on an "AS IS" BASIS,
- # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- # See the License for the specific language governing permissions and
- # limitations under the License.
- from collections.abc import Sequence
- from typing import Any, Optional, Union
- from torch import Tensor
- from typing_extensions import Literal
- from torchmetrics.classification.base import _ClassificationTaskWrapper
- from torchmetrics.classification.precision_recall_curve import (
- BinaryPrecisionRecallCurve,
- MulticlassPrecisionRecallCurve,
- MultilabelPrecisionRecallCurve,
- )
- from torchmetrics.functional.classification.recall_fixed_precision import (
- _binary_recall_at_fixed_precision_arg_validation,
- _binary_recall_at_fixed_precision_compute,
- _multiclass_recall_at_fixed_precision_arg_compute,
- _multiclass_recall_at_fixed_precision_arg_validation,
- _multilabel_recall_at_fixed_precision_arg_compute,
- _multilabel_recall_at_fixed_precision_arg_validation,
- )
- from torchmetrics.metric import Metric
- from torchmetrics.utilities.data import dim_zero_cat
- from torchmetrics.utilities.enums import ClassificationTask
- from torchmetrics.utilities.imports import _MATPLOTLIB_AVAILABLE
- from torchmetrics.utilities.plot import _AX_TYPE, _PLOT_OUT_TYPE
- if not _MATPLOTLIB_AVAILABLE:
- __doctest_skip__ = [
- "BinaryRecallAtFixedPrecision.plot",
- "MulticlassRecallAtFixedPrecision.plot",
- "MultilabelRecallAtFixedPrecision.plot",
- ]
- class BinaryRecallAtFixedPrecision(BinaryPrecisionRecallCurve):
- r"""Compute the highest possible recall value given the minimum precision thresholds provided.
- This is done by first calculating the precision-recall curve for different thresholds and the find the recall for
- a given precision level.
- As input to ``forward`` and ``update`` the metric accepts the following input:
- - ``preds`` (:class:`~torch.Tensor`): A float tensor of shape ``(N, ...)``. Preds should be a tensor containing
- probabilities or logits for each observation. If preds has values outside [0,1] range we consider the input
- to be logits and will auto apply sigmoid per element.
- - ``target`` (:class:`~torch.Tensor`): An int tensor of shape ``(N, ...)``. Target should be a tensor containing
- ground truth labels, and therefore only contain {0,1} values (except if `ignore_index` is specified). The value
- 1 always encodes the positive class.
- .. tip::
- Additional dimension ``...`` will be flattened into the batch dimension.
- As output to ``forward`` and ``compute`` the metric returns the following output:
- - ``recall`` (:class:`~torch.Tensor`): A scalar tensor with the maximum recall for the given precision level
- - ``threshold`` (:class:`~torch.Tensor`): A scalar tensor with the corresponding threshold level
- .. note::
- The implementation both supports calculating the metric in a non-binned but accurate version and a
- binned version that is less accurate but more memory efficient. Setting the `thresholds` argument to ``None``
- will activate the non-binned version that uses memory of size :math:`\mathcal{O}(n_{samples})` whereas setting
- the `thresholds` argument to either an integer, list or a 1d tensor will use a binned version that uses memory
- of size :math:`\mathcal{O}(n_{thresholds})` (constant memory).
- Args:
- min_precision: float value specifying minimum precision threshold.
- thresholds:
- Can be one of:
- - If set to ``None``, will use a non-binned approach where thresholds are dynamically calculated from
- all the data. Most accurate but also most memory consuming approach.
- - If set to an ``int`` (larger than 1), will use that number of thresholds linearly spaced from
- 0 to 1 as bins for the calculation.
- - If set to an ``list`` of floats, will use the indicated thresholds in the list as bins for the calculation
- - If set to an 1d :class:`~torch.Tensor` of floats, will use the indicated thresholds in the tensor as
- bins for the calculation.
- validate_args: bool indicating if input arguments and tensors should be validated for correctness.
- Set to ``False`` for faster computations.
- kwargs: Additional keyword arguments, see :ref:`Metric kwargs` for more info.
- Example:
- >>> from torch import tensor
- >>> from torchmetrics.classification import BinaryRecallAtFixedPrecision
- >>> preds = tensor([0, 0.5, 0.7, 0.8])
- >>> target = tensor([0, 1, 1, 0])
- >>> metric = BinaryRecallAtFixedPrecision(min_precision=0.5, thresholds=None)
- >>> metric(preds, target)
- (tensor(1.), tensor(0.5000))
- >>> metric = BinaryRecallAtFixedPrecision(min_precision=0.5, thresholds=5)
- >>> metric(preds, target)
- (tensor(1.), tensor(0.5000))
- """
- is_differentiable: bool = False
- higher_is_better: Optional[bool] = None
- full_state_update: bool = False
- plot_lower_bound: float = 0.0
- plot_upper_bound: float = 1.0
- def __init__(
- self,
- min_precision: float,
- thresholds: Optional[Union[int, list[float], Tensor]] = None,
- ignore_index: Optional[int] = None,
- validate_args: bool = True,
- **kwargs: Any,
- ) -> None:
- super().__init__(thresholds, ignore_index, validate_args=False, **kwargs)
- if validate_args:
- _binary_recall_at_fixed_precision_arg_validation(min_precision, thresholds, ignore_index)
- self.validate_args = validate_args
- self.min_precision = min_precision
- def compute(self) -> tuple[Tensor, Tensor]: # type: ignore[override]
- """Compute metric."""
- state = (dim_zero_cat(self.preds), dim_zero_cat(self.target)) if self.thresholds is None else self.confmat
- return _binary_recall_at_fixed_precision_compute(state, self.thresholds, self.min_precision)
- def plot( # type: ignore[override]
- self, val: Optional[Union[Tensor, Sequence[Tensor]]] = None, ax: Optional[_AX_TYPE] = None
- ) -> _PLOT_OUT_TYPE:
- """Plot a single or multiple values from the metric.
- Args:
- val: Either a single result from calling `metric.forward` or `metric.compute` or a list of these results.
- If no value is provided, will automatically call `metric.compute` and plot that result.
- ax: An matplotlib axis object. If provided will add plot to that axis
- Returns:
- Figure object and Axes object
- Raises:
- ModuleNotFoundError:
- If `matplotlib` is not installed
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting a single value
- >>> from torchmetrics.classification import BinaryRecallAtFixedPrecision
- >>> metric = BinaryRecallAtFixedPrecision(min_precision=0.5)
- >>> metric.update(rand(10), randint(2,(10,)))
- >>> fig_, ax_ = metric.plot() # the returned plot only shows the maximum recall value by default
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting multiple values
- >>> from torchmetrics.classification import BinaryRecallAtFixedPrecision
- >>> metric = BinaryRecallAtFixedPrecision(min_precision=0.5)
- >>> values = [ ]
- >>> for _ in range(10):
- ... # we index by 0 such that only the maximum recall value is plotted
- ... values.append(metric(rand(10), randint(2,(10,)))[0])
- >>> fig_, ax_ = metric.plot(values)
- """
- val = val or self.compute()[0] # by default we select the maximum recall value to plot
- return self._plot(val, ax)
- class MulticlassRecallAtFixedPrecision(MulticlassPrecisionRecallCurve):
- r"""Compute the highest possible recall value given the minimum precision thresholds provided.
- This is done by first calculating the precision-recall curve for different thresholds and the find the recall for
- a given precision level.
- For multiclass the metric is calculated by iteratively treating each class as the positive class and all other
- classes as the negative, which is referred to as the one-vs-rest approach. One-vs-one is currently not supported by
- this metric.
- As input to ``forward`` and ``update`` the metric accepts the following input:
- - ``preds`` (:class:`~torch.Tensor`): A float tensor of shape ``(N, C, ...)``. Preds should be a tensor
- containing probabilities or logits for each observation. If preds has values outside [0,1] range we consider
- the input to be logits and will auto apply softmax per sample.
- - ``target`` (:class:`~torch.Tensor`): An int tensor of shape ``(N, ...)``. Target should be a tensor containing
- ground truth labels, and therefore only contain values in the [0, n_classes-1] range (except if `ignore_index`
- is specified).
- .. tip::
- Additional dimension ``...`` will be flattened into the batch dimension.
- As output to ``forward`` and ``compute`` the metric returns a tuple of either 2 tensors or 2 lists containing:
- - ``recall`` (:class:`~torch.Tensor`): A 1d tensor of size ``(n_classes, )`` with the maximum recall for the
- given precision level per class
- - ``threshold`` (:class:`~torch.Tensor`): A 1d tensor of size ``(n_classes, )`` with the corresponding threshold
- level per class
- .. note::
- The implementation both supports calculating the metric in a non-binned but accurate version and a binned version
- that is less accurate but more memory efficient. Setting the `thresholds` argument to ``None`` will activate the
- non-binned version that uses memory of size :math:`\mathcal{O}(n_{samples})` whereas setting the `thresholds`
- argument to either an integer, list or a 1d tensor will use a binned version that uses memory of
- size :math:`\mathcal{O}(n_{thresholds} \times n_{classes})` (constant memory).
- Args:
- num_classes: Integer specifying the number of classes
- min_precision: float value specifying minimum precision threshold.
- thresholds:
- Can be one of:
- - If set to `None`, will use a non-binned approach where thresholds are dynamically calculated from
- all the data. Most accurate but also most memory consuming approach.
- - If set to an ``int`` (larger than 1), will use that number of thresholds linearly spaced from
- 0 to 1 as bins for the calculation.
- - If set to an ``list`` of floats, will use the indicated thresholds in the list as bins for the calculation
- - If set to an 1d :class:`~torch.Tensor` of floats, will use the indicated thresholds in the tensor as
- bins for the calculation.
- validate_args: bool indicating if input arguments and tensors should be validated for correctness.
- Set to ``False`` for faster computations.
- kwargs: Additional keyword arguments, see :ref:`Metric kwargs` for more info.
- Example:
- >>> from torch import tensor
- >>> from torchmetrics.classification import MulticlassRecallAtFixedPrecision
- >>> preds = tensor([[0.75, 0.05, 0.05, 0.05, 0.05],
- ... [0.05, 0.75, 0.05, 0.05, 0.05],
- ... [0.05, 0.05, 0.75, 0.05, 0.05],
- ... [0.05, 0.05, 0.05, 0.75, 0.05]])
- >>> target = tensor([0, 1, 3, 2])
- >>> metric = MulticlassRecallAtFixedPrecision(num_classes=5, min_precision=0.5, thresholds=None)
- >>> metric(preds, target)
- (tensor([1., 1., 0., 0., 0.]), tensor([0.7500, 0.7500, nan, nan, nan]))
- >>> mcrafp = MulticlassRecallAtFixedPrecision(num_classes=5, min_precision=0.5, thresholds=5)
- >>> mcrafp(preds, target)
- (tensor([1., 1., 0., 0., 0.]), tensor([0.7500, 0.7500, nan, nan, nan]))
- """
- is_differentiable: bool = False
- higher_is_better: Optional[bool] = None
- full_state_update: bool = False
- plot_lower_bound: float = 0.0
- plot_upper_bound: float = 1.0
- plot_legend_name: str = "Class"
- def __init__(
- self,
- num_classes: int,
- min_precision: float,
- thresholds: Optional[Union[int, list[float], Tensor]] = None,
- ignore_index: Optional[int] = None,
- validate_args: bool = True,
- **kwargs: Any,
- ) -> None:
- super().__init__(
- num_classes=num_classes, thresholds=thresholds, ignore_index=ignore_index, validate_args=False, **kwargs
- )
- if validate_args:
- _multiclass_recall_at_fixed_precision_arg_validation(num_classes, min_precision, thresholds, ignore_index)
- self.validate_args = validate_args
- self.min_precision = min_precision
- def compute(self) -> tuple[Tensor, Tensor]: # type: ignore[override]
- """Compute metric."""
- state = (dim_zero_cat(self.preds), dim_zero_cat(self.target)) if self.thresholds is None else self.confmat
- return _multiclass_recall_at_fixed_precision_arg_compute(
- state, self.num_classes, self.thresholds, self.min_precision
- )
- def plot( # type: ignore[override]
- self, val: Optional[Union[Tensor, Sequence[Tensor]]] = None, ax: Optional[_AX_TYPE] = None
- ) -> _PLOT_OUT_TYPE:
- """Plot a single or multiple values from the metric.
- Args:
- val: Either a single result from calling `metric.forward` or `metric.compute` or a list of these results.
- If no value is provided, will automatically call `metric.compute` and plot that result.
- ax: An matplotlib axis object. If provided will add plot to that axis
- Returns:
- Figure object and Axes object
- Raises:
- ModuleNotFoundError:
- If `matplotlib` is not installed
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting a single value per class
- >>> from torchmetrics.classification import MulticlassRecallAtFixedPrecision
- >>> metric = MulticlassRecallAtFixedPrecision(num_classes=3, min_precision=0.5)
- >>> metric.update(rand(20, 3).softmax(dim=-1), randint(3, (20,)))
- >>> fig_, ax_ = metric.plot() # the returned plot only shows the maximum recall value by default
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting a multiple values per class
- >>> from torchmetrics.classification import MulticlassRecallAtFixedPrecision
- >>> metric = MulticlassRecallAtFixedPrecision(num_classes=3, min_precision=0.5)
- >>> values = []
- >>> for _ in range(20):
- ... # we index by 0 such that only the maximum recall value is plotted
- ... values.append(metric(rand(20, 3).softmax(dim=-1), randint(3, (20,)))[0])
- >>> fig_, ax_ = metric.plot(values)
- """
- val = val or self.compute()[0] # by default we select the maximum recall value to plot
- return self._plot(val, ax)
- class MultilabelRecallAtFixedPrecision(MultilabelPrecisionRecallCurve):
- r"""Compute the highest possible recall value given the minimum precision thresholds provided.
- This is done by first calculating the precision-recall curve for different thresholds and the find the recall for
- a given precision level.
- As input to ``forward`` and ``update`` the metric accepts the following input:
- - ``preds`` (:class:`~torch.Tensor`): A float tensor of shape ``(N, C, ...)``. Preds should be a tensor
- containing probabilities or logits for each observation. If preds has values outside [0,1] range we consider
- the input to be logits and will auto apply sigmoid per element.
- - ``target`` (:class:`~torch.Tensor`): An int tensor of shape ``(N, ...)``. Target should be a tensor containing
- ground truth labels, and therefore only contain {0,1} values (except if `ignore_index` is specified). The value
- 1 always encodes the positive class.
- .. tip::
- Additional dimension ``...`` will be flattened into the batch dimension.
- As output to ``forward`` and ``compute`` the metric returns a tuple of either 2 tensors or 2 lists containing:
- - ``recall`` (:class:`~torch.Tensor`): A 1d tensor of size ``(n_classes, )`` with the maximum recall for the
- given precision level per class
- - ``threshold`` (:class:`~torch.Tensor`): A 1d tensor of size ``(n_classes, )`` with the corresponding threshold
- level per class
- .. note::
- The implementation both supports calculating the metric in a non-binned but accurate version and a binned version
- that is less accurate but more memory efficient. Setting the `thresholds` argument to ```None``` will activate
- the non-binned version that uses memory of size :math:`\mathcal{O}(n_{samples})` whereas setting the
- `thresholds` argument to either an integer, list or a 1d tensor will use a binned version that uses memory of
- size :math:`\mathcal{O}(n_{thresholds} \times n_{labels})` (constant memory).
- Args:
- num_labels: Integer specifying the number of labels
- min_precision: float value specifying minimum precision threshold.
- thresholds:
- Can be one of:
- - If set to ``None``, will use a non-binned approach where thresholds are dynamically calculated from
- all the data. Most accurate but also most memory consuming approach.
- - If set to an ``int`` (larger than 1), will use that number of thresholds linearly spaced from
- 0 to 1 as bins for the calculation.
- - If set to an ``list`` of floats, will use the indicated thresholds in the list as bins for the calculation
- - If set to an 1d :class:`~torch.Tensor` of floats, will use the indicated thresholds in the tensor as
- bins for the calculation.
- validate_args: bool indicating if input arguments and tensors should be validated for correctness.
- Set to ``False`` for faster computations.
- kwargs: Additional keyword arguments, see :ref:`Metric kwargs` for more info.
- Example:
- >>> from torch import tensor
- >>> from torchmetrics.classification import MultilabelRecallAtFixedPrecision
- >>> preds = tensor([[0.75, 0.05, 0.35],
- ... [0.45, 0.75, 0.05],
- ... [0.05, 0.55, 0.75],
- ... [0.05, 0.65, 0.05]])
- >>> target = tensor([[1, 0, 1],
- ... [0, 0, 0],
- ... [0, 1, 1],
- ... [1, 1, 1]])
- >>> metric = MultilabelRecallAtFixedPrecision(num_labels=3, min_precision=0.5, thresholds=None)
- >>> metric(preds, target)
- (tensor([1., 1., 1.]), tensor([0.0500, 0.5500, 0.0500]))
- >>> mlrafp = MultilabelRecallAtFixedPrecision(num_labels=3, min_precision=0.5, thresholds=5)
- >>> mlrafp(preds, target)
- (tensor([1., 1., 1.]), tensor([0.0000, 0.5000, 0.0000]))
- """
- is_differentiable: bool = False
- higher_is_better: Optional[bool] = None
- full_state_update: bool = False
- plot_lower_bound: float = 0.0
- plot_upper_bound: float = 1.0
- plot_legend_name: str = "Label"
- def __init__(
- self,
- num_labels: int,
- min_precision: float,
- thresholds: Optional[Union[int, list[float], Tensor]] = None,
- ignore_index: Optional[int] = None,
- validate_args: bool = True,
- **kwargs: Any,
- ) -> None:
- super().__init__(
- num_labels=num_labels, thresholds=thresholds, ignore_index=ignore_index, validate_args=False, **kwargs
- )
- if validate_args:
- _multilabel_recall_at_fixed_precision_arg_validation(num_labels, min_precision, thresholds, ignore_index)
- self.validate_args = validate_args
- self.min_precision = min_precision
- def compute(self) -> tuple[Tensor, Tensor]: # type: ignore[override]
- """Compute metric."""
- state = (dim_zero_cat(self.preds), dim_zero_cat(self.target)) if self.thresholds is None else self.confmat
- return _multilabel_recall_at_fixed_precision_arg_compute(
- state, self.num_labels, self.thresholds, self.ignore_index, self.min_precision
- )
- def plot( # type: ignore[override]
- self, val: Optional[Union[Tensor, Sequence[Tensor]]] = None, ax: Optional[_AX_TYPE] = None
- ) -> _PLOT_OUT_TYPE:
- """Plot a single or multiple values from the metric.
- Args:
- val: Either a single result from calling `metric.forward` or `metric.compute` or a list of these results.
- If no value is provided, will automatically call `metric.compute` and plot that result.
- ax: An matplotlib axis object. If provided will add plot to that axis
- Returns:
- Figure object and Axes object
- Raises:
- ModuleNotFoundError:
- If `matplotlib` is not installed
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting a single value
- >>> from torchmetrics.classification import MultilabelRecallAtFixedPrecision
- >>> metric = MultilabelRecallAtFixedPrecision(num_labels=3, min_precision=0.5)
- >>> metric.update(rand(20, 3), randint(2, (20, 3)))
- >>> fig_, ax_ = metric.plot() # the returned plot only shows the maximum recall value by default
- .. plot::
- :scale: 75
- >>> from torch import rand, randint
- >>> # Example plotting multiple values
- >>> from torchmetrics.classification import MultilabelRecallAtFixedPrecision
- >>> metric = MultilabelRecallAtFixedPrecision(num_labels=3, min_precision=0.5)
- >>> values = [ ]
- >>> for _ in range(10):
- ... # we index by 0 such that only the maximum recall value is plotted
- ... values.append(metric(rand(20, 3), randint(2, (20, 3)))[0])
- >>> fig_, ax_ = metric.plot(values)
- """
- val = val or self.compute()[0] # by default we select the maximum recall value to plot
- return self._plot(val, ax)
- class RecallAtFixedPrecision(_ClassificationTaskWrapper):
- r"""Compute the highest possible recall value given the minimum precision thresholds provided.
- This is done by first calculating the precision-recall curve for different thresholds and the find the recall for
- a given precision level.
- This function is a simple wrapper to get the task specific versions of this metric, which is done by setting the
- ``task`` argument to either ``'binary'``, ``'multiclass'`` or ``'multilabel'``. See the documentation of
- :class:`~torchmetrics.classification.BinaryRecallAtFixedPrecision`,
- :class:`~torchmetrics.classification.MulticlassRecallAtFixedPrecision` and
- :class:`~torchmetrics.classification.MultilabelRecallAtFixedPrecision` for the specific details of each argument
- influence and examples.
- """
- def __new__( # type: ignore[misc]
- cls: type["RecallAtFixedPrecision"],
- task: Literal["binary", "multiclass", "multilabel"],
- min_precision: float,
- thresholds: Optional[Union[int, list[float], Tensor]] = None,
- num_classes: Optional[int] = None,
- num_labels: Optional[int] = None,
- ignore_index: Optional[int] = None,
- validate_args: bool = True,
- **kwargs: Any,
- ) -> Metric:
- """Initialize task metric."""
- task = ClassificationTask.from_str(task)
- if task == ClassificationTask.BINARY:
- return BinaryRecallAtFixedPrecision(min_precision, thresholds, ignore_index, validate_args, **kwargs)
- if task == ClassificationTask.MULTICLASS:
- if not isinstance(num_classes, int):
- raise ValueError(f"`num_classes` is expected to be `int` but `{type(num_classes)} was passed.`")
- return MulticlassRecallAtFixedPrecision(
- num_classes, min_precision, thresholds, ignore_index, validate_args, **kwargs
- )
- if task == ClassificationTask.MULTILABEL:
- if not isinstance(num_labels, int):
- raise ValueError(f"`num_labels` is expected to be `int` but `{type(num_labels)} was passed.`")
- return MultilabelRecallAtFixedPrecision(
- num_labels, min_precision, thresholds, ignore_index, validate_args, **kwargs
- )
- raise ValueError(f"Task {task} not supported!")
|