| 12345678910111213141516171819202122232425262728293031323334353637383940414243444546474849505152535455565758596061626364656667686970717273747576777879808182838485868788899091929394959697989910010110210310410510610710810911011111211311411511611711811912012112212312412512612712812913013113213313413513613713813914014114214314414514614714814915015115215315415515615715815916016116216316416516616716816917017117217317417517617717817918018118218318418518618718818919019119219319419519619719819920020120220320420520620720820921021121221321421521621721821922022122222322422522622722822923023123223323423523623723823924024124224324424524624724824925025125225325425525625725825926026126226326426526626726826927027127227327427527627727827928028128228328428528628728828929029129229329429529629729829930030130230330430530630730830931031131231331431531631731831932032132232332432532632732832933033133233333433533633733833934034134234334434534634734834935035135235335435535635735835936036136236336436536636736836937037137237337437537637737837938038138238338438538638738838939039139239339439539639739839940040140240340440540640740840941041141241341441541641741841942042142242342442542642742842943043143243343443543643743843944044144244344444544644744844945045145245345445545645745845946046146246346446546646746846947047147247347447547647747847948048148248348448548648748848949049149249349449549649749849950050150250350450550650750850951051151251351451551651751851952052152252352452552652752852953053153253353453553653753853954054154254354454554654754854955055155255355455555655755855956056156256356456556656756856957057157257357457557657757857958058158258358458558658758858959059159259359459559659759859960060160260360460560660760860961061161261361461561661761861962062162262362462562662762862963063163263363463563663763863964064164264364464564664764864965065165265365465565665765865966066166266366466566666766866967067167267367467567667767867968068168268368468568668768868969069169269369469569669769869970070170270370470570670770870971071171271371471571671771871972072172272372472572672772872973073173273373473573673773873974074174274374474574674774874975075175275375475575675775875976076176276376476576676776876977077177277377477577677777877978078178278378478578678778878979079179279379479579679779879980080180280380480580680780880981081181281381481581681781881982082182282382482582682782882983083183283383483583683783883984084184284384484584684784884985085185285385485585685785885986086186286386486586686786886987087187287387487587687787887988088188288388488588688788888989089189289389489589689789889990090190290390490590690790890991091191291391491591691791891992092192292392492592692792892993093193293393493593693793893994094194294394494594694794894995095195295395495595695795895996096196296396496596696796896997097197297397497597697797897998098198298398498598698798898999099199299399499599699799899910001001100210031004100510061007100810091010101110121013101410151016101710181019102010211022102310241025102610271028102910301031103210331034103510361037103810391040104110421043104410451046104710481049105010511052105310541055105610571058105910601061106210631064106510661067106810691070107110721073107410751076107710781079108010811082108310841085108610871088108910901091109210931094109510961097109810991100110111021103110411051106110711081109111011111112111311141115111611171118111911201121112211231124112511261127112811291130113111321133113411351136113711381139114011411142114311441145114611471148114911501151115211531154115511561157115811591160116111621163116411651166116711681169117011711172117311741175117611771178117911801181118211831184118511861187118811891190119111921193119411951196119711981199120012011202120312041205120612071208120912101211121212131214121512161217121812191220122112221223122412251226122712281229123012311232123312341235123612371238123912401241124212431244124512461247124812491250125112521253125412551256125712581259126012611262126312641265126612671268126912701271127212731274127512761277127812791280128112821283128412851286128712881289129012911292129312941295129612971298129913001301130213031304130513061307130813091310131113121313131413151316131713181319132013211322132313241325132613271328132913301331133213331334133513361337133813391340134113421343134413451346134713481349135013511352135313541355135613571358135913601361136213631364136513661367136813691370137113721373137413751376137713781379138013811382138313841385138613871388138913901391139213931394139513961397139813991400140114021403140414051406140714081409141014111412141314141415141614171418141914201421142214231424142514261427142814291430143114321433143414351436143714381439144014411442144314441445144614471448144914501451145214531454145514561457145814591460146114621463146414651466146714681469147014711472147314741475147614771478147914801481148214831484148514861487148814891490149114921493149414951496149714981499150015011502150315041505150615071508150915101511151215131514151515161517151815191520152115221523152415251526152715281529153015311532153315341535153615371538153915401541154215431544154515461547154815491550155115521553155415551556155715581559156015611562156315641565156615671568156915701571157215731574157515761577157815791580158115821583158415851586158715881589159015911592159315941595159615971598159916001601160216031604160516061607160816091610161116121613161416151616161716181619162016211622162316241625162616271628162916301631163216331634163516361637163816391640164116421643164416451646164716481649165016511652165316541655165616571658165916601661166216631664166516661667166816691670167116721673167416751676167716781679168016811682168316841685168616871688168916901691169216931694169516961697169816991700170117021703170417051706170717081709171017111712171317141715171617171718171917201721172217231724172517261727172817291730173117321733173417351736173717381739174017411742174317441745174617471748174917501751175217531754175517561757175817591760176117621763176417651766176717681769177017711772177317741775177617771778177917801781178217831784178517861787178817891790179117921793179417951796179717981799180018011802180318041805180618071808180918101811181218131814181518161817181818191820182118221823182418251826182718281829183018311832183318341835183618371838183918401841184218431844184518461847184818491850185118521853185418551856185718581859186018611862186318641865186618671868186918701871187218731874187518761877187818791880188118821883188418851886188718881889189018911892189318941895189618971898189919001901190219031904190519061907190819091910191119121913191419151916191719181919192019211922192319241925192619271928192919301931193219331934193519361937193819391940194119421943194419451946194719481949195019511952195319541955195619571958195919601961196219631964196519661967196819691970197119721973197419751976197719781979198019811982198319841985198619871988198919901991199219931994199519961997199819992000200120022003200420052006200720082009201020112012201320142015201620172018201920202021202220232024202520262027202820292030203120322033203420352036203720382039204020412042204320442045204620472048204920502051205220532054205520562057205820592060206120622063206420652066206720682069207020712072207320742075207620772078207920802081208220832084208520862087208820892090209120922093209420952096209720982099210021012102210321042105210621072108210921102111211221132114211521162117211821192120212121222123212421252126212721282129213021312132213321342135213621372138213921402141214221432144214521462147214821492150215121522153215421552156215721582159216021612162216321642165216621672168216921702171217221732174217521762177217821792180218121822183218421852186218721882189219021912192219321942195219621972198219922002201220222032204220522062207220822092210221122122213221422152216221722182219222022212222222322242225222622272228222922302231223222332234223522362237223822392240224122422243224422452246224722482249225022512252225322542255225622572258225922602261226222632264226522662267226822692270227122722273227422752276227722782279228022812282228322842285228622872288228922902291229222932294229522962297229822992300230123022303230423052306230723082309231023112312231323142315231623172318231923202321232223232324232523262327232823292330233123322333233423352336233723382339234023412342234323442345234623472348234923502351235223532354235523562357235823592360236123622363236423652366236723682369237023712372237323742375237623772378237923802381238223832384238523862387238823892390239123922393239423952396239723982399240024012402240324042405240624072408240924102411241224132414241524162417241824192420242124222423242424252426242724282429243024312432243324342435243624372438243924402441244224432444244524462447244824492450245124522453245424552456245724582459246024612462246324642465246624672468246924702471247224732474247524762477247824792480248124822483248424852486248724882489249024912492249324942495249624972498249925002501250225032504250525062507250825092510251125122513251425152516251725182519252025212522252325242525252625272528252925302531253225332534253525362537253825392540254125422543254425452546254725482549255025512552255325542555255625572558255925602561256225632564256525662567256825692570257125722573257425752576257725782579258025812582258325842585258625872588258925902591259225932594259525962597259825992600260126022603260426052606260726082609261026112612261326142615261626172618261926202621262226232624262526262627262826292630263126322633263426352636263726382639264026412642264326442645264626472648264926502651265226532654265526562657265826592660266126622663266426652666266726682669267026712672267326742675267626772678267926802681268226832684268526862687268826892690269126922693269426952696269726982699270027012702270327042705270627072708270927102711271227132714271527162717271827192720272127222723272427252726272727282729273027312732273327342735273627372738273927402741274227432744274527462747274827492750275127522753275427552756275727582759276027612762276327642765276627672768276927702771277227732774277527762777277827792780278127822783278427852786278727882789279027912792279327942795279627972798279928002801280228032804280528062807280828092810281128122813281428152816281728182819282028212822282328242825282628272828282928302831283228332834283528362837283828392840284128422843284428452846284728482849285028512852285328542855285628572858285928602861286228632864286528662867286828692870287128722873287428752876287728782879288028812882288328842885288628872888288928902891289228932894289528962897289828992900290129022903290429052906290729082909291029112912291329142915291629172918291929202921292229232924292529262927292829292930293129322933293429352936293729382939294029412942294329442945294629472948294929502951295229532954295529562957295829592960296129622963296429652966296729682969297029712972297329742975297629772978297929802981298229832984298529862987298829892990299129922993299429952996299729982999300030013002300330043005300630073008300930103011301230133014301530163017301830193020302130223023302430253026302730283029303030313032303330343035303630373038303930403041304230433044304530463047304830493050305130523053305430553056305730583059306030613062306330643065306630673068306930703071307230733074307530763077307830793080308130823083308430853086308730883089309030913092309330943095309630973098309931003101310231033104310531063107310831093110311131123113311431153116311731183119312031213122312331243125312631273128312931303131313231333134313531363137313831393140314131423143314431453146314731483149315031513152315331543155315631573158315931603161316231633164316531663167316831693170317131723173317431753176317731783179318031813182318331843185318631873188318931903191319231933194319531963197319831993200320132023203320432053206320732083209321032113212321332143215321632173218321932203221322232233224322532263227322832293230323132323233323432353236323732383239324032413242324332443245324632473248324932503251325232533254325532563257325832593260326132623263326432653266326732683269327032713272327332743275327632773278327932803281328232833284328532863287328832893290329132923293329432953296329732983299330033013302330333043305330633073308330933103311331233133314331533163317331833193320332133223323332433253326332733283329333033313332333333343335333633373338333933403341334233433344334533463347334833493350335133523353335433553356335733583359336033613362336333643365336633673368336933703371337233733374337533763377337833793380338133823383338433853386338733883389339033913392339333943395339633973398339934003401340234033404340534063407340834093410341134123413341434153416341734183419342034213422342334243425342634273428342934303431343234333434343534363437343834393440344134423443344434453446344734483449345034513452345334543455345634573458345934603461346234633464346534663467346834693470347134723473347434753476347734783479348034813482348334843485348634873488348934903491349234933494349534963497349834993500350135023503350435053506350735083509351035113512351335143515351635173518351935203521352235233524352535263527352835293530353135323533353435353536353735383539354035413542354335443545354635473548354935503551355235533554355535563557355835593560356135623563356435653566356735683569357035713572357335743575357635773578357935803581358235833584358535863587358835893590359135923593359435953596359735983599360036013602360336043605360636073608360936103611361236133614361536163617361836193620362136223623362436253626362736283629363036313632363336343635363636373638363936403641364236433644364536463647364836493650365136523653365436553656365736583659366036613662366336643665366636673668366936703671367236733674367536763677367836793680368136823683368436853686368736883689369036913692369336943695369636973698369937003701370237033704370537063707370837093710371137123713371437153716371737183719372037213722372337243725372637273728372937303731373237333734373537363737373837393740374137423743374437453746374737483749375037513752375337543755375637573758375937603761376237633764376537663767376837693770377137723773377437753776377737783779378037813782378337843785378637873788378937903791379237933794379537963797379837993800380138023803380438053806380738083809381038113812381338143815381638173818381938203821382238233824382538263827382838293830383138323833383438353836383738383839384038413842384338443845384638473848384938503851385238533854385538563857385838593860386138623863386438653866386738683869387038713872387338743875387638773878387938803881388238833884388538863887388838893890389138923893389438953896389738983899390039013902390339043905390639073908390939103911391239133914391539163917391839193920392139223923392439253926392739283929393039313932393339343935393639373938393939403941394239433944394539463947394839493950395139523953395439553956395739583959396039613962396339643965396639673968396939703971397239733974397539763977397839793980398139823983398439853986398739883989399039913992399339943995399639973998399940004001400240034004400540064007400840094010401140124013401440154016401740184019402040214022402340244025402640274028402940304031403240334034403540364037403840394040404140424043404440454046404740484049405040514052405340544055405640574058405940604061406240634064406540664067406840694070407140724073407440754076407740784079408040814082408340844085408640874088408940904091409240934094409540964097409840994100410141024103410441054106410741084109411041114112411341144115411641174118411941204121412241234124412541264127412841294130413141324133413441354136413741384139414041414142414341444145414641474148414941504151415241534154415541564157415841594160416141624163416441654166416741684169417041714172417341744175417641774178417941804181418241834184418541864187418841894190419141924193419441954196419741984199420042014202420342044205420642074208420942104211421242134214421542164217421842194220422142224223422442254226422742284229423042314232423342344235423642374238423942404241424242434244424542464247424842494250425142524253425442554256425742584259426042614262426342644265426642674268426942704271427242734274427542764277427842794280428142824283428442854286428742884289429042914292429342944295429642974298429943004301430243034304430543064307430843094310431143124313431443154316431743184319432043214322432343244325432643274328432943304331433243334334433543364337433843394340434143424343434443454346434743484349435043514352435343544355435643574358435943604361436243634364436543664367436843694370437143724373437443754376437743784379438043814382438343844385438643874388438943904391439243934394439543964397439843994400440144024403440444054406440744084409441044114412441344144415441644174418441944204421442244234424442544264427442844294430443144324433443444354436443744384439444044414442444344444445444644474448444944504451445244534454445544564457445844594460446144624463446444654466446744684469447044714472447344744475447644774478447944804481448244834484448544864487448844894490449144924493449444954496449744984499450045014502450345044505450645074508450945104511451245134514451545164517451845194520452145224523452445254526452745284529453045314532453345344535453645374538453945404541454245434544454545464547454845494550455145524553455445554556455745584559456045614562456345644565456645674568456945704571457245734574457545764577457845794580458145824583458445854586458745884589459045914592459345944595459645974598459946004601460246034604460546064607460846094610461146124613461446154616461746184619462046214622462346244625462646274628462946304631463246334634463546364637463846394640464146424643464446454646464746484649465046514652465346544655465646574658465946604661466246634664466546664667466846694670467146724673467446754676467746784679468046814682468346844685468646874688468946904691469246934694469546964697469846994700470147024703470447054706470747084709471047114712471347144715471647174718471947204721472247234724472547264727472847294730473147324733473447354736473747384739474047414742474347444745474647474748474947504751475247534754475547564757475847594760476147624763476447654766476747684769477047714772477347744775477647774778477947804781478247834784478547864787478847894790479147924793479447954796479747984799480048014802480348044805480648074808480948104811481248134814481548164817481848194820482148224823482448254826482748284829483048314832483348344835483648374838483948404841484248434844484548464847484848494850485148524853485448554856485748584859486048614862486348644865486648674868 |
- # this program corresponds to special.py
- ### Means test is not done yet
- # E Means test is giving error (E)
- # F Means test is failing (F)
- # EF Means test is giving error and Failing
- #! Means test is segfaulting
- # 8 Means test runs forever
- ### test_besselpoly
- ### test_modfresnelp
- ### test_modfresnelm
- # test_pbdv_seq
- ### test_pbvv_seq
- ### test_sph_harm
- import functools
- import itertools
- import operator
- import platform
- import sys
- import warnings
- import numpy as np
- from numpy import (array, isnan, r_, arange, finfo, pi, sin, cos, tan, exp,
- log, zeros, sqrt, asarray, inf, nan_to_num, real, arctan, double,
- array_equal)
- import pytest
- from pytest import raises as assert_raises
- from numpy.testing import (assert_equal, assert_array_equal, assert_,
- assert_allclose, assert_array_almost_equal_nulp)
- from scipy import special
- import scipy.special._ufuncs as cephes
- from scipy.special import ellipe, ellipk, ellipkm1
- from scipy.special import elliprc, elliprd, elliprf, elliprg, elliprj
- from scipy.special import softplus
- from scipy.special import mathieu_odd_coef, mathieu_even_coef, stirling2
- from scipy._lib._util import np_long, np_ulong
- from scipy._lib._array_api import xp_assert_close, xp_assert_equal, SCIPY_ARRAY_API
- from scipy.special._basic import (
- _FACTORIALK_LIMITS_64BITS, _FACTORIALK_LIMITS_32BITS, _is_subdtype
- )
- from scipy.special._testutils import with_special_errors, \
- assert_func_equal, FuncData
- from scipy.integrate import quad
- import math
- native_int = np.int32 if (
- sys.platform == 'win32'
- or platform.architecture()[0] == "32bit"
- ) else np.int64
- class TestCephes:
- def test_airy(self):
- cephes.airy(0)
- def test_airye(self):
- cephes.airye(0)
- def test_binom(self):
- n = np.array([0.264, 4, 5.2, 17])
- k = np.array([2, 0.4, 7, 3.3])
- nk = np.array(np.broadcast_arrays(n[:,None], k[None,:])
- ).reshape(2, -1).T
- rknown = np.array([[-0.097152, 0.9263051596159367, 0.01858423645695389,
- -0.007581020651518199],[6, 2.0214389119675666, 0, 2.9827344527963846],
- [10.92, 2.22993515861399, -0.00585728, 10.468891352063146],
- [136, 3.5252179590758828, 19448, 1024.5526916174495]])
- assert_func_equal(cephes.binom, rknown.ravel(), nk, rtol=1e-13)
- # Test branches in implementation
- rng = np.random.RandomState(1234)
- n = np.r_[np.arange(-7, 30), 1000*rng.rand(30) - 500]
- k = np.arange(0, 102)
- nk = np.array(np.broadcast_arrays(n[:,None], k[None,:])
- ).reshape(2, -1).T
- assert_func_equal(cephes.binom,
- cephes.binom(nk[:,0], nk[:,1] * (1 + 1e-15)),
- nk,
- atol=1e-10, rtol=1e-10)
- def test_binom_2(self):
- # Test branches in implementation
- np.random.seed(1234)
- n = np.r_[np.logspace(1, 300, 20)]
- k = np.arange(0, 102)
- nk = np.array(np.broadcast_arrays(n[:,None], k[None,:])
- ).reshape(2, -1).T
- assert_func_equal(cephes.binom,
- cephes.binom(nk[:,0], nk[:,1] * (1 + 1e-15)),
- nk,
- atol=1e-10, rtol=1e-10)
- def test_binom_exact(self):
- @np.vectorize
- def binom_int(n, k):
- n = int(n)
- k = int(k)
- num = 1
- den = 1
- for i in range(1, k+1):
- num *= i + n - k
- den *= i
- return float(num/den)
- np.random.seed(1234)
- n = np.arange(1, 15)
- k = np.arange(0, 15)
- nk = np.array(np.broadcast_arrays(n[:,None], k[None,:])
- ).reshape(2, -1).T
- nk = nk[nk[:,0] >= nk[:,1]]
- assert_func_equal(cephes.binom,
- binom_int(nk[:,0], nk[:,1]),
- nk,
- atol=0, rtol=0)
- def test_binom_nooverflow_8346(self):
- # Test (binom(n, k) doesn't overflow prematurely */
- dataset = [
- (1000, 500, 2.70288240945436551e+299),
- (1002, 501, 1.08007396880791225e+300),
- (1004, 502, 4.31599279169058121e+300),
- (1006, 503, 1.72468101616263781e+301),
- (1008, 504, 6.89188009236419153e+301),
- (1010, 505, 2.75402257948335448e+302),
- (1012, 506, 1.10052048531923757e+303),
- (1014, 507, 4.39774063758732849e+303),
- (1016, 508, 1.75736486108312519e+304),
- (1018, 509, 7.02255427788423734e+304),
- (1020, 510, 2.80626776829962255e+305),
- (1022, 511, 1.12140876377061240e+306),
- (1024, 512, 4.48125455209897109e+306),
- (1026, 513, 1.79075474304149900e+307),
- (1028, 514, 7.15605105487789676e+307)
- ]
- dataset = np.asarray(dataset)
- FuncData(cephes.binom, dataset, (0, 1), 2, rtol=1e-12).check()
- def test_bdtr(self):
- assert_equal(cephes.bdtr(1,1,0.5),1.0)
- def test_bdtri(self):
- assert_equal(cephes.bdtri(1,3,0.5),0.5)
- def test_bdtrc(self):
- assert_equal(cephes.bdtrc(1,3,0.5),0.5)
- def test_bdtrin(self):
- assert_equal(cephes.bdtrin(1,0,1),5.0)
- def test_bdtrik(self):
- cephes.bdtrik(1,3,0.5)
- def test_bei(self):
- assert_equal(cephes.bei(0),0.0)
- def test_beip(self):
- assert_equal(cephes.beip(0),0.0)
- def test_ber(self):
- assert_equal(cephes.ber(0),1.0)
- def test_berp(self):
- assert_equal(cephes.berp(0),0.0)
- def test_besselpoly(self):
- assert_equal(cephes.besselpoly(0,0,0),1.0)
- def test_cbrt(self):
- assert_allclose(cephes.cbrt(1), 1.0, atol=1e-6, rtol=0)
- def test_chdtr(self):
- assert_equal(cephes.chdtr(1,0),0.0)
- def test_chdtrc(self):
- assert_equal(cephes.chdtrc(1,0),1.0)
- def test_chdtri(self):
- assert_equal(cephes.chdtri(1,1),0.0)
- def test_chndtrix(self):
- assert_equal(cephes.chndtrix(0,1,0),0.0)
- def test_cosdg(self):
- assert_equal(cephes.cosdg(0),1.0)
- def test_cosm1(self):
- assert_equal(cephes.cosm1(0),0.0)
- def test_cotdg(self):
- assert_allclose(cephes.cotdg(45), 1.0, atol=1.5e-7, rtol=0)
- def test_dawsn(self):
- assert_equal(cephes.dawsn(0),0.0)
- assert_allclose(cephes.dawsn(1.23), 0.50053727749081767)
- def test_diric(self):
- # Test behavior near multiples of 2pi. Regression test for issue
- # described in gh-4001.
- n_odd = [1, 5, 25]
- x = np.array(2*np.pi + 5e-5).astype(np.float32)
- assert_allclose(special.diric(x, n_odd), 1.0, atol=1.5e-7, rtol=0)
- x = np.array(2*np.pi + 1e-9).astype(np.float64)
- assert_allclose(special.diric(x, n_odd), 1.0, atol=1.5e-15, rtol=0)
- x = np.array(2*np.pi + 1e-15).astype(np.float64)
- assert_allclose(special.diric(x, n_odd), 1.0, atol=1.5e-15, rtol=0)
- if hasattr(np, 'float128'):
- # No float128 available in 32-bit numpy
- x = np.array(2*np.pi + 1e-12).astype(np.float128)
- assert_allclose(special.diric(x, n_odd), 1.0, atol=1.5e-19, rtol=0)
- n_even = [2, 4, 24]
- x = np.array(2*np.pi + 1e-9).astype(np.float64)
- assert_allclose(special.diric(x, n_even), -1.0, atol=1.5e-15, rtol=0)
- # Test at some values not near a multiple of pi
- x = np.arange(0.2*np.pi, 1.0*np.pi, 0.2*np.pi)
- octave_result = [0.872677996249965, 0.539344662916632,
- 0.127322003750035, -0.206011329583298]
- assert_allclose(special.diric(x, 3), octave_result, atol=1.5e-15, rtol=0)
- def test_diric_broadcasting(self):
- x = np.arange(5)
- n = np.array([1, 3, 7])
- assert_(special.diric(x[:, np.newaxis], n).shape == (x.size, n.size))
- def test_ellipe(self):
- assert_equal(cephes.ellipe(1),1.0)
- def test_ellipeinc(self):
- assert_equal(cephes.ellipeinc(0,1),0.0)
- def test_ellipj(self):
- cephes.ellipj(0,1)
- def test_ellipk(self):
- assert_allclose(ellipk(0), pi/2)
- def test_ellipkinc(self):
- assert_equal(cephes.ellipkinc(0,0),0.0)
- def test_erf(self):
- assert_equal(cephes.erf(0), 0.0)
- def test_erf_symmetry(self):
- x = 5.905732037710919
- assert_equal(cephes.erf(x) + cephes.erf(-x), 0.0)
- def test_erfc(self):
- assert_equal(cephes.erfc(0), 1.0)
- def test_exp10(self):
- assert_allclose(cephes.exp10(2), 100.0, atol=1e-6, rtol=0)
- def test_exp2(self):
- assert_equal(cephes.exp2(2),4.0)
- def test_expm1(self):
- assert_equal(cephes.expm1(0),0.0)
- assert_equal(cephes.expm1(np.inf), np.inf)
- assert_equal(cephes.expm1(-np.inf), -1)
- assert_equal(cephes.expm1(np.nan), np.nan)
- def test_expm1_complex(self):
- expm1 = cephes.expm1
- assert_equal(expm1(0 + 0j), 0 + 0j)
- assert_equal(expm1(complex(np.inf, 0)), complex(np.inf, 0))
- assert_equal(expm1(complex(np.inf, 1)), complex(np.inf, np.inf))
- assert_equal(expm1(complex(np.inf, 2)), complex(-np.inf, np.inf))
- assert_equal(expm1(complex(np.inf, 4)), complex(-np.inf, -np.inf))
- assert_equal(expm1(complex(np.inf, 5)), complex(np.inf, -np.inf))
- assert_equal(expm1(complex(1, np.inf)), complex(np.nan, np.nan))
- assert_equal(expm1(complex(0, np.inf)), complex(np.nan, np.nan))
- assert_equal(expm1(complex(np.inf, np.inf)), complex(np.inf, np.nan))
- assert_equal(expm1(complex(-np.inf, np.inf)), complex(-1, 0))
- assert_equal(expm1(complex(-np.inf, np.nan)), complex(-1, 0))
- assert_equal(expm1(complex(np.inf, np.nan)), complex(np.inf, np.nan))
- assert_equal(expm1(complex(0, np.nan)), complex(np.nan, np.nan))
- assert_equal(expm1(complex(1, np.nan)), complex(np.nan, np.nan))
- assert_equal(expm1(complex(np.nan, 1)), complex(np.nan, np.nan))
- assert_equal(expm1(complex(np.nan, np.nan)), complex(np.nan, np.nan))
- @pytest.mark.xfail(reason='The real part of expm1(z) bad at these points')
- def test_expm1_complex_hard(self):
- # The real part of this function is difficult to evaluate when
- # z.real = -log(cos(z.imag)).
- y = np.array([0.1, 0.2, 0.3, 5, 11, 20])
- x = -np.log(np.cos(y))
- z = x + 1j*y
- # evaluate using mpmath.expm1 with dps=1000
- expected = np.array([-5.5507901846769623e-17+0.10033467208545054j,
- 2.4289354732893695e-18+0.20271003550867248j,
- 4.5235500262585768e-17+0.30933624960962319j,
- 7.8234305217489006e-17-3.3805150062465863j,
- -1.3685191953697676e-16-225.95084645419513j,
- 8.7175620481291045e-17+2.2371609442247422j])
- found = cephes.expm1(z)
- # this passes.
- assert_array_almost_equal_nulp(found.imag, expected.imag, 3)
- # this fails.
- assert_array_almost_equal_nulp(found.real, expected.real, 20)
- def test_fdtr(self):
- assert_equal(cephes.fdtr(1, 1, 0), 0.0)
- # Computed using Wolfram Alpha: CDF[FRatioDistribution[1e-6, 5], 10]
- assert_allclose(cephes.fdtr(1e-6, 5, 10), 0.9999940790193488,
- rtol=1e-12)
- def test_fdtrc(self):
- assert_equal(cephes.fdtrc(1, 1, 0), 1.0)
- # Computed using Wolfram Alpha:
- # 1 - CDF[FRatioDistribution[2, 1/10], 1e10]
- assert_allclose(cephes.fdtrc(2, 0.1, 1e10), 0.27223784621293512,
- rtol=1e-12)
- def test_fdtri(self):
- assert_allclose(cephes.fdtri(1, 1, [0.499, 0.501]),
- array([0.9937365, 1.00630298]), rtol=1e-6)
- # From Wolfram Alpha:
- # CDF[FRatioDistribution[1/10, 1], 3] = 0.8756751669632105666874...
- p = 0.8756751669632105666874
- assert_allclose(cephes.fdtri(0.1, 1, p), 3, rtol=1e-12)
- def test_gh20835(self):
- # gh-20835 reported fdtri failing for extreme inputs
- dfd, dfn, x = 1, 50000, 29.72591544307521
- assert_allclose(cephes.fdtri(dfd, dfn, cephes.fdtr(dfd, dfn, x)), x, rtol=1e-15)
- def test_fdtri_mysterious_failure(self):
- assert_allclose(cephes.fdtri(1, 1, 0.5), 1)
- def test_fdtridfd(self):
- assert_equal(cephes.fdtridfd(1,0,0),5.0)
- def test_fresnel(self):
- assert_equal(cephes.fresnel(0),(0.0,0.0))
- def test_gamma(self):
- assert_equal(cephes.gamma(5),24.0)
- def test_gammainccinv(self):
- assert_equal(cephes.gammainccinv(5,1),0.0)
- def test_gammaln(self):
- cephes.gammaln(10)
- def test_gammasgn(self):
- vals = np.array(
- [-np.inf, -4, -3.5, -2.3, -0.0, 0.0, 1, 4.2, np.inf], np.float64
- )
- reference = np.array(
- [np.nan, np.nan, 1.0, -1.0, -1.0, 1.0, 1.0, 1.0, 1.0], np.float64
- )
- assert_array_equal(cephes.gammasgn(vals), reference)
- def test_gdtr(self):
- assert_equal(cephes.gdtr(1,1,0),0.0)
- def test_gdtr_inf(self):
- assert_equal(cephes.gdtr(1,1,np.inf),1.0)
- def test_gdtrc(self):
- assert_equal(cephes.gdtrc(1,1,0),1.0)
- def test_gdtria(self):
- assert_equal(cephes.gdtria(0,1,1),0.0)
- def test_gdtrib(self):
- cephes.gdtrib(1,0,1)
- # assert_equal(cephes.gdtrib(1,0,1),5.0)
- def test_gdtrix(self):
- cephes.gdtrix(1,1,.1)
- def test_hankel1(self):
- cephes.hankel1(1,1)
- def test_hankel1e(self):
- cephes.hankel1e(1,1)
- def test_hankel2(self):
- cephes.hankel2(1,1)
- def test_hankel2e(self):
- cephes.hankel2e(1,1)
- def test_hyp1f1(self):
- assert_allclose(cephes.hyp1f1(1, 1, 1), exp(1.0), atol=1e-6, rtol=0)
- assert_allclose(cephes.hyp1f1(3, 4, -6), 0.026056422099537251095,
- atol=1e-6, rtol=0)
- cephes.hyp1f1(1,1,1)
- def test_hyp2f1(self):
- assert_equal(cephes.hyp2f1(1,1,1,0),1.0)
- def test_i0(self):
- assert_equal(cephes.i0(0),1.0)
- def test_i0e(self):
- assert_equal(cephes.i0e(0),1.0)
- def test_i1(self):
- assert_equal(cephes.i1(0),0.0)
- def test_i1e(self):
- assert_equal(cephes.i1e(0),0.0)
- def test_it2i0k0(self):
- cephes.it2i0k0(1)
- def test_it2j0y0(self):
- cephes.it2j0y0(1)
- def test_it2struve0(self):
- cephes.it2struve0(1)
- def test_itairy(self):
- cephes.itairy(1)
- def test_iti0k0(self):
- assert_equal(cephes.iti0k0(0),(0.0,0.0))
- def test_itj0y0(self):
- assert_equal(cephes.itj0y0(0),(0.0,0.0))
- def test_itmodstruve0(self):
- assert_equal(cephes.itmodstruve0(0),0.0)
- def test_itstruve0(self):
- assert_equal(cephes.itstruve0(0),0.0)
- def test_iv(self):
- assert_equal(cephes.iv(1,0),0.0)
- def test_ive(self):
- assert_equal(cephes.ive(1,0),0.0)
- def test_j0(self):
- assert_equal(cephes.j0(0),1.0)
- def test_j1(self):
- assert_equal(cephes.j1(0),0.0)
- def test_jn(self):
- assert_equal(cephes.jn(0,0),1.0)
- def test_jv(self):
- assert_equal(cephes.jv(0,0),1.0)
- def test_jve(self):
- assert_equal(cephes.jve(0,0),1.0)
- def test_k0(self):
- cephes.k0(2)
- def test_k0e(self):
- cephes.k0e(2)
- def test_k1(self):
- cephes.k1(2)
- def test_k1e(self):
- cephes.k1e(2)
- def test_kei(self):
- cephes.kei(2)
- def test_keip(self):
- assert_equal(cephes.keip(0),0.0)
- def test_ker(self):
- cephes.ker(2)
- def test_kerp(self):
- cephes.kerp(2)
- def test_kelvin(self):
- cephes.kelvin(2)
- def test_kn(self):
- cephes.kn(1,1)
- def test_kolmogi(self):
- assert_equal(cephes.kolmogi(1),0.0)
- assert_(np.isnan(cephes.kolmogi(np.nan)))
- def test_kolmogorov(self):
- assert_equal(cephes.kolmogorov(0), 1.0)
- def test_kolmogp(self):
- assert_equal(cephes._kolmogp(0), -0.0)
- def test_kolmogc(self):
- assert_equal(cephes._kolmogc(0), 0.0)
- def test_kolmogci(self):
- assert_equal(cephes._kolmogci(0), 0.0)
- assert_(np.isnan(cephes._kolmogci(np.nan)))
- def test_kv(self):
- cephes.kv(1,1)
- def test_kve(self):
- cephes.kve(1,1)
- def test_log1p(self):
- log1p = cephes.log1p
- assert_equal(log1p(0), 0.0)
- assert_equal(log1p(-1), -np.inf)
- assert_equal(log1p(-2), np.nan)
- assert_equal(log1p(np.inf), np.inf)
- def test_log1p_complex(self):
- log1p = cephes.log1p
- c = complex
- assert_equal(log1p(0 + 0j), 0 + 0j)
- assert_equal(log1p(c(-1, 0)), c(-np.inf, 0))
- with warnings.catch_warnings():
- warnings.filterwarnings(
- "ignore", "invalid value encountered in multiply", RuntimeWarning)
- assert_allclose(log1p(c(1, np.inf)), c(np.inf, np.pi/2))
- assert_equal(log1p(c(1, np.nan)), c(np.nan, np.nan))
- assert_allclose(log1p(c(-np.inf, 1)), c(np.inf, np.pi))
- assert_equal(log1p(c(np.inf, 1)), c(np.inf, 0))
- assert_allclose(log1p(c(-np.inf, np.inf)), c(np.inf, 3*np.pi/4))
- assert_allclose(log1p(c(np.inf, np.inf)), c(np.inf, np.pi/4))
- assert_equal(log1p(c(np.inf, np.nan)), c(np.inf, np.nan))
- assert_equal(log1p(c(-np.inf, np.nan)), c(np.inf, np.nan))
- assert_equal(log1p(c(np.nan, np.inf)), c(np.inf, np.nan))
- assert_equal(log1p(c(np.nan, 1)), c(np.nan, np.nan))
- assert_equal(log1p(c(np.nan, np.nan)), c(np.nan, np.nan))
- def test_lpmv(self):
- assert_equal(cephes.lpmv(0,0,1),1.0)
- def test_mathieu_a_q0(self):
- # When q is 0, the exact result is m**2.
- m = np.array([1, 2, 5])
- assert_equal(cephes.mathieu_a(m, 0), m**2)
- # Reference values were computed with Wolfram Alpha:
- # MathieuCharacteristicA[m, q]
- @pytest.mark.parametrize(
- 'm, q, ref',
- [(0, 8, -10.6067292355526479852024),
- (3, 3/2, 9.19330104768060974047804),
- (5, 1/4, 25.0013021454698022809572),
- (8, -10, 64.8008910105046444848962)]
- )
- def test_mathieu_a(self, m, q, ref):
- y = cephes.mathieu_a(m, q)
- assert_allclose(y, ref, rtol=1e-15)
- def test_mathieu_b_q0(self):
- # When q is 0, the exact result is m**2.
- m = np.array([1, 2, 5])
- assert_equal(cephes.mathieu_b(m, 0), m**2)
- # Reference values were computed with Wolfram Alpha:
- # MathieuCharacteristicB[m, q]
- @pytest.mark.parametrize(
- 'm, q, ref',
- [(1, 15, -22.5130034974234666335),
- (5, 3, 25.1870798027185125480),
- (9, 1/4, 81.00039062627570760760),
- (10, -3, 100.0454683359769326164)]
- )
- def test_mathieu_b(self, m, q, ref):
- y = cephes.mathieu_b(m, q)
- assert_allclose(y, ref, rtol=1e-15)
- def test_mathieu_cem(self):
- assert_equal(cephes.mathieu_cem(1,0,0),(1.0,0.0))
- # Test AMS 20.2.27
- @np.vectorize
- def ce_smallq(m, q, z):
- z *= np.pi/180
- if m == 0:
- # + O(q^2)
- return 2**(-0.5) * (1 - .5*q*cos(2*z))
- elif m == 1:
- # + O(q^2)
- return cos(z) - q/8 * cos(3*z)
- elif m == 2:
- # + O(q^2)
- return cos(2*z) - q*(cos(4*z)/12 - 1/4)
- else:
- # + O(q^2)
- return cos(m*z) - q*(cos((m+2)*z)/(4*(m+1)) - cos((m-2)*z)/(4*(m-1)))
- m = np.arange(0, 100)
- q = np.r_[0, np.logspace(-30, -9, 10)]
- assert_allclose(cephes.mathieu_cem(m[:,None], q[None,:], 0.123)[0],
- ce_smallq(m[:,None], q[None,:], 0.123),
- rtol=1e-14, atol=0)
- def test_mathieu_sem(self):
- assert_equal(cephes.mathieu_sem(1,0,0),(0.0,1.0))
- # Test AMS 20.2.27
- @np.vectorize
- def se_smallq(m, q, z):
- z *= np.pi/180
- if m == 1:
- # + O(q^2)
- return sin(z) - q/8 * sin(3*z)
- elif m == 2:
- # + O(q^2)
- return sin(2*z) - q*sin(4*z)/12
- else:
- # + O(q^2)
- return sin(m*z) - q*(sin((m+2)*z)/(4*(m+1)) - sin((m-2)*z)/(4*(m-1)))
- m = np.arange(1, 100)
- q = np.r_[0, np.logspace(-30, -9, 10)]
- assert_allclose(cephes.mathieu_sem(m[:,None], q[None,:], 0.123)[0],
- se_smallq(m[:,None], q[None,:], 0.123),
- rtol=1e-14, atol=0)
- def test_mathieu_modcem1(self):
- assert_equal(cephes.mathieu_modcem1(1,0,0),(0.0,0.0))
- def test_mathieu_modcem2(self):
- cephes.mathieu_modcem2(1,1,1)
- # Test reflection relation AMS 20.6.19
- m = np.arange(0, 4)[:,None,None]
- q = np.r_[np.logspace(-2, 2, 10)][None,:,None]
- z = np.linspace(0, 1, 7)[None,None,:]
- y1 = cephes.mathieu_modcem2(m, q, -z)[0]
- fr = -cephes.mathieu_modcem2(m, q, 0)[0] / cephes.mathieu_modcem1(m, q, 0)[0]
- y2 = (-cephes.mathieu_modcem2(m, q, z)[0]
- - 2*fr*cephes.mathieu_modcem1(m, q, z)[0])
- assert_allclose(y1, y2, rtol=1e-10)
- def test_mathieu_modsem1(self):
- assert_equal(cephes.mathieu_modsem1(1,0,0),(0.0,0.0))
- def test_mathieu_modsem2(self):
- cephes.mathieu_modsem2(1,1,1)
- # Test reflection relation AMS 20.6.20
- m = np.arange(1, 4)[:,None,None]
- q = np.r_[np.logspace(-2, 2, 10)][None,:,None]
- z = np.linspace(0, 1, 7)[None,None,:]
- y1 = cephes.mathieu_modsem2(m, q, -z)[0]
- fr = cephes.mathieu_modsem2(m, q, 0)[1] / cephes.mathieu_modsem1(m, q, 0)[1]
- y2 = (cephes.mathieu_modsem2(m, q, z)[0]
- - 2*fr*cephes.mathieu_modsem1(m, q, z)[0])
- assert_allclose(y1, y2, rtol=1e-10)
- def test_mathieu_overflow(self):
- # Check that these return NaNs instead of causing a SEGV
- assert_equal(cephes.mathieu_cem(10000, 0, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_sem(10000, 0, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_cem(10000, 1.5, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_sem(10000, 1.5, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_modcem1(10000, 1.5, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_modsem1(10000, 1.5, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_modcem2(10000, 1.5, 1.3), (np.nan, np.nan))
- assert_equal(cephes.mathieu_modsem2(10000, 1.5, 1.3), (np.nan, np.nan))
- def test_mathieu_ticket_1847(self):
- # Regression test --- this call had some out-of-bounds access
- # and could return nan occasionally
- for k in range(60):
- v = cephes.mathieu_modsem2(2, 100, -1)
- # Values from ACM TOMS 804 (derivate by numerical differentiation)
- assert_allclose(v[0], 0.1431742913063671074347, rtol=1e-10)
- assert_allclose(v[1], 0.9017807375832909144719, rtol=1e-4)
- def test_modfresnelm(self):
- cephes.modfresnelm(0)
- def test_modfresnelp(self):
- cephes.modfresnelp(0)
- def test_modstruve(self):
- assert_equal(cephes.modstruve(1,0),0.0)
- def test_nbdtr(self):
- assert_equal(cephes.nbdtr(1,1,1),1.0)
- def test_nbdtrc(self):
- assert_equal(cephes.nbdtrc(1,1,1),0.0)
- def test_nbdtri(self):
- assert_equal(cephes.nbdtri(1,1,1),1.0)
- def test_nbdtrik(self):
- cephes.nbdtrik(1,.4,.5)
- def test_nbdtrin(self):
- assert_equal(cephes.nbdtrin(1,0,0),5.0)
- def test_ncfdtr(self):
- assert_equal(cephes.ncfdtr(1,1,1,0),0.0)
- def test_ncfdtri(self):
- assert_equal(cephes.ncfdtri(1, 1, 1, 0), 0.0)
- f = [0.5, 1, 1.5]
- p = cephes.ncfdtr(2, 3, 1.5, f)
- assert_allclose(cephes.ncfdtri(2, 3, 1.5, p), f)
- @pytest.mark.xfail(
- reason=(
- "ncfdtr uses a Boost math implementation but ncfdtridfd"
- "inverts the less accurate cdflib implementation of ncfdtr."
- )
- )
- def test_ncfdtridfd(self):
- dfd = [1, 2, 3]
- p = cephes.ncfdtr(2, dfd, 0.25, 15)
- assert_allclose(cephes.ncfdtridfd(2, p, 0.25, 15), dfd)
- @pytest.mark.xfail(
- reason=(
- "ncfdtr uses a Boost math implementation but ncfdtridfn"
- "inverts the less accurate cdflib implementation of ncfdtr."
- )
- )
- def test_ncfdtridfn(self):
- dfn = [0.1, 1, 2, 3, 1e4]
- p = cephes.ncfdtr(dfn, 2, 0.25, 15)
- assert_allclose(cephes.ncfdtridfn(p, 2, 0.25, 15), dfn, rtol=1e-5)
- @pytest.mark.xfail(
- reason=(
- "ncfdtr uses a Boost math implementation but ncfdtrinc"
- "inverts the less accurate cdflib implementation of ncfdtr."
- )
- )
- def test_ncfdtrinc(self):
- nc = [0.5, 1.5, 2.0]
- p = cephes.ncfdtr(2, 3, nc, 15)
- assert_allclose(cephes.ncfdtrinc(2, 3, p, 15), nc)
- def test_nctdtr(self):
- assert_equal(cephes.nctdtr(1,0,0),0.5)
- assert_equal(cephes.nctdtr(9, 65536, 45), 0.0)
- assert_allclose(cephes.nctdtr(np.inf, 1., 1.), 0.5, atol=1e-4, rtol=0)
- assert_(np.isnan(cephes.nctdtr(2., np.inf, 10.)))
- assert_allclose(cephes.nctdtr(2., 1., np.inf), 1., atol=1e-6, rtol=0)
- assert_(np.isnan(cephes.nctdtr(np.nan, 1., 1.)))
- assert_(np.isnan(cephes.nctdtr(2., np.nan, 1.)))
- assert_(np.isnan(cephes.nctdtr(2., 1., np.nan)))
- def test_nctdtridf(self):
- cephes.nctdtridf(1,0.5,0)
- def test_nctdtrinc(self):
- cephes.nctdtrinc(1,0,0)
- def test_nctdtrit(self):
- cephes.nctdtrit(.1,0.2,.5)
- def test_nrdtrimn(self):
- assert_allclose(cephes.nrdtrimn(0.5, 1, 1), 1.0, atol=1e-6, rtol=0)
- def test_nrdtrisd(self):
- assert_allclose(cephes.nrdtrisd(0.5,0.5,0.5), 0.0,
- atol=0, rtol=0)
- def test_obl_ang1(self):
- cephes.obl_ang1(1,1,1,0)
- def test_obl_ang1_cv(self):
- result = cephes.obl_ang1_cv(1,1,1,1,0)
- assert_allclose(result[0], 1.0, atol=1.5e-7, rtol=0)
- assert_allclose(result[1], 0.0, atol=1.5e-7, rtol=0)
- def test_obl_cv(self):
- assert_equal(cephes.obl_cv(1,1,0),2.0)
- def test_obl_rad1(self):
- cephes.obl_rad1(1,1,1,0)
- def test_obl_rad1_cv(self):
- cephes.obl_rad1_cv(1,1,1,1,0)
- def test_obl_rad2(self):
- cephes.obl_rad2(1,1,1,0)
- def test_obl_rad2_cv(self):
- cephes.obl_rad2_cv(1,1,1,1,0)
- def test_pbdv(self):
- assert_equal(cephes.pbdv(1,0),(0.0,1.0))
- def test_pbvv(self):
- cephes.pbvv(1,0)
- def test_pbwa(self):
- cephes.pbwa(1,0)
- def test_pdtr(self):
- val = cephes.pdtr(0, 1)
- assert_allclose(val, np.exp(-1), atol=1.5e-7, rtol=0)
- # Edge case: m = 0.
- val = cephes.pdtr([0, 1, 2], 0)
- assert_array_equal(val, [1, 1, 1])
- def test_pdtrc(self):
- val = cephes.pdtrc(0, 1)
- assert_allclose(val, 1 - np.exp(-1), atol=1.5e-7, rtol=0)
- # Edge case: m = 0.
- val = cephes.pdtrc([0, 1, 2], 0.0)
- assert_array_equal(val, [0, 0, 0])
- def test_pdtri(self):
- with warnings.catch_warnings():
- msg = "floating point number truncated to an integer"
- warnings.filterwarnings("ignore", msg, RuntimeWarning)
- cephes.pdtri(0.5,0.5)
- def test_pro_ang1(self):
- cephes.pro_ang1(1,1,1,0)
- def test_pro_ang1_cv(self):
- assert_allclose(cephes.pro_ang1_cv(1, 1, 1, 1, 0), array((1.0, 0.0)),
- atol=1.5e-7, rtol=0)
- def test_pro_cv(self):
- assert_equal(cephes.pro_cv(1,1,0),2.0)
- def test_pro_rad1(self):
- cephes.pro_rad1(1,1,1,0.1)
- def test_pro_rad1_cv(self):
- cephes.pro_rad1_cv(1,1,1,1,0)
- def test_pro_rad2(self):
- cephes.pro_rad2(1,1,1,0)
- def test_pro_rad2_cv(self):
- cephes.pro_rad2_cv(1,1,1,1,0)
- def test_psi(self):
- cephes.psi(1)
- def test_radian(self):
- assert_equal(cephes.radian(0,0,0),0)
- def test_rgamma(self):
- assert_equal(cephes.rgamma(1),1.0)
- def test_round(self):
- assert_equal(cephes.round(3.4),3.0)
- assert_equal(cephes.round(-3.4),-3.0)
- assert_equal(cephes.round(3.6),4.0)
- assert_equal(cephes.round(-3.6),-4.0)
- assert_equal(cephes.round(3.5),4.0)
- assert_equal(cephes.round(-3.5),-4.0)
- def test_shichi(self):
- cephes.shichi(1)
- def test_sici(self):
- cephes.sici(1)
- s, c = cephes.sici(np.inf)
- assert_allclose(s, np.pi * 0.5, atol=1.5e-7, rtol=0)
- assert_allclose(c, 0, atol=1.5e-7, rtol=0)
- s, c = cephes.sici(-np.inf)
- assert_allclose(s, -np.pi * 0.5, atol=1.5e-7, rtol=0)
- assert_(np.isnan(c), "cosine integral(-inf) is not nan")
- def test_sindg(self):
- assert_equal(cephes.sindg(90),1.0)
- def test_smirnov(self):
- assert_equal(cephes.smirnov(1,.1),0.9)
- assert_(np.isnan(cephes.smirnov(1,np.nan)))
- def test_smirnovp(self):
- assert_equal(cephes._smirnovp(1, .1), -1)
- assert_equal(cephes._smirnovp(2, 0.75), -2*(0.25)**(2-1))
- assert_equal(cephes._smirnovp(3, 0.75), -3*(0.25)**(3-1))
- assert_(np.isnan(cephes._smirnovp(1, np.nan)))
- def test_smirnovc(self):
- assert_equal(cephes._smirnovc(1,.1),0.1)
- assert_(np.isnan(cephes._smirnovc(1,np.nan)))
- x10 = np.linspace(0, 1, 11, endpoint=True)
- assert_allclose(cephes._smirnovc(3, x10), 1 - cephes.smirnov(3, x10),
- atol=1.5e-7, rtol=0)
- x4 = np.linspace(0, 1, 5, endpoint=True)
- assert_allclose(cephes._smirnovc(4, x4), 1 - cephes.smirnov(4, x4),
- atol=1.5e-7, rtol=0)
- def test_smirnovi(self):
- assert_allclose(cephes.smirnov(1, cephes.smirnovi(1, 0.4)), 0.4,
- atol=1.5e-7, rtol=0)
- assert_allclose(cephes.smirnov(1, cephes.smirnovi(1, 0.6)), 0.6,
- atol=1.5e-7, rtol=0)
- assert_(np.isnan(cephes.smirnovi(1,np.nan)))
- def test_smirnovci(self):
- assert_allclose(cephes._smirnovc(1, cephes._smirnovci(1, 0.4)), 0.4,
- atol=1.5e-7, rtol=0)
- assert_allclose(cephes._smirnovc(1, cephes._smirnovci(1, 0.6)), 0.6,
- atol=1.5e-7, rtol=0)
- assert_(np.isnan(cephes._smirnovci(1,np.nan)))
- def test_spence(self):
- assert_equal(cephes.spence(1),0.0)
- def test_stdtr(self):
- assert_equal(cephes.stdtr(1,0),0.5)
- assert_allclose(cephes.stdtr(1, 1), 0.75, atol=1.5e-7, rtol=0)
- assert_allclose(cephes.stdtr(1, 2), 0.852416382349, atol=1.5e-7, rtol=0)
- def test_stdtridf(self):
- cephes.stdtridf(0.7,1)
- def test_stdtrit(self):
- cephes.stdtrit(1,0.7)
- def test_struve(self):
- assert_equal(cephes.struve(0,0),0.0)
- def test_tandg(self):
- assert_equal(cephes.tandg(45),1.0)
- def test_tklmbda(self):
- assert_allclose(cephes.tklmbda(1, 1), 1.0, atol=1.5e-7, rtol=0)
- def test_y0(self):
- cephes.y0(1)
- def test_y1(self):
- cephes.y1(1)
- def test_yn(self):
- cephes.yn(1,1)
- def test_yv(self):
- cephes.yv(1,1)
- def test_yve(self):
- cephes.yve(1,1)
- def test_wofz(self):
- z = [complex(624.2,-0.26123), complex(-0.4,3.), complex(0.6,2.),
- complex(-1.,1.), complex(-1.,-9.), complex(-1.,9.),
- complex(-0.0000000234545,1.1234), complex(-3.,5.1),
- complex(-53,30.1), complex(0.0,0.12345),
- complex(11,1), complex(-22,-2), complex(9,-28),
- complex(21,-33), complex(1e5,1e5), complex(1e14,1e14)
- ]
- w = [
- complex(-3.78270245518980507452677445620103199303131110e-7,
- 0.000903861276433172057331093754199933411710053155),
- complex(0.1764906227004816847297495349730234591778719532788,
- -0.02146550539468457616788719893991501311573031095617),
- complex(0.2410250715772692146133539023007113781272362309451,
- 0.06087579663428089745895459735240964093522265589350),
- complex(0.30474420525691259245713884106959496013413834051768,
- -0.20821893820283162728743734725471561394145872072738),
- complex(7.317131068972378096865595229600561710140617977e34,
- 8.321873499714402777186848353320412813066170427e34),
- complex(0.0615698507236323685519612934241429530190806818395,
- -0.00676005783716575013073036218018565206070072304635),
- complex(0.3960793007699874918961319170187598400134746631,
- -5.593152259116644920546186222529802777409274656e-9),
- complex(0.08217199226739447943295069917990417630675021771804,
- -0.04701291087643609891018366143118110965272615832184),
- complex(0.00457246000350281640952328010227885008541748668738,
- -0.00804900791411691821818731763401840373998654987934),
- complex(0.8746342859608052666092782112565360755791467973338452,
- 0.),
- complex(0.00468190164965444174367477874864366058339647648741,
- 0.0510735563901306197993676329845149741675029197050),
- complex(-0.0023193175200187620902125853834909543869428763219,
- -0.025460054739731556004902057663500272721780776336),
- complex(9.11463368405637174660562096516414499772662584e304,
- 3.97101807145263333769664875189354358563218932e305),
- complex(-4.4927207857715598976165541011143706155432296e281,
- -2.8019591213423077494444700357168707775769028e281),
- complex(2.820947917809305132678577516325951485807107151e-6,
- 2.820947917668257736791638444590253942253354058e-6),
- complex(2.82094791773878143474039725787438662716372268e-15,
- 2.82094791773878143474039725773333923127678361e-15)
- ]
- assert_func_equal(cephes.wofz, w, z, rtol=1e-13)
- class TestAiry:
- def test_airy(self):
- # This tests the airy function to ensure 8 place accuracy in computation
- x = special.airy(.99)
- assert_allclose(x, array([0.13689066, -0.16050153, 1.19815925, 0.92046818]),
- atol=1.5e-8, rtol=0)
- x = special.airy(.41)
- assert_allclose(x, array([0.25238916, -.23480512, 0.80686202, 0.51053919]),
- atol=1.5e-8, rtol=0)
- x = special.airy(-.36)
- assert_allclose(x, array([0.44508477,-0.23186773,0.44939534,0.48105354]),
- atol=1.5e-8, rtol=0)
- def test_airye(self):
- a = special.airye(0.01)
- b = special.airy(0.01)
- b1 = [None]*4
- for n in range(2):
- b1[n] = b[n]*exp(2.0/3.0*0.01*sqrt(0.01))
- for n in range(2,4):
- b1[n] = b[n]*exp(-abs(real(2.0/3.0*0.01*sqrt(0.01))))
- assert_allclose(a, b1, atol=1.5e-6, rtol=0)
- def test_bi_zeros(self):
- bi = special.bi_zeros(2)
- bia = (array([-1.17371322, -3.2710930]),
- array([-2.29443968, -4.07315509]),
- array([-0.45494438, 0.39652284]),
- array([0.60195789, -0.76031014]))
- assert_allclose(bi, bia, atol=1.5e-4, rtol=0)
- bi = special.bi_zeros(5)
- assert_allclose(bi[0], array([-1.173713222709127,
- -3.271093302836352,
- -4.830737841662016,
- -6.169852128310251,
- -7.376762079367764]),
- atol=1.5e-11, rtol=0)
- assert_allclose(bi[1], array([-2.294439682614122,
- -4.073155089071828,
- -5.512395729663599,
- -6.781294445990305,
- -7.940178689168587]),
- atol=1.5e-10, rtol=0)
- assert_allclose(bi[2], array([-0.454944383639657,
- 0.396522836094465,
- -0.367969161486959,
- 0.349499116831805,
- -0.336026240133662]),
- atol=1.5e-11, rtol=0)
- assert_allclose(bi[3], array([0.601957887976239,
- -0.760310141492801,
- 0.836991012619261,
- -0.88947990142654,
- 0.929983638568022]),
- atol=1.5e-10, rtol=0)
- def test_ai_zeros(self):
- ai = special.ai_zeros(1)
- assert_allclose(ai, (array([-2.33810741]),
- array([-1.01879297]),
- array([0.5357]),
- array([0.7012])),
- atol=1.5e-4, rtol=0)
- @pytest.mark.fail_slow(5)
- def test_ai_zeros_big(self):
- z, zp, ai_zpx, aip_zx = special.ai_zeros(50000)
- ai_z, aip_z, _, _ = special.airy(z)
- ai_zp, aip_zp, _, _ = special.airy(zp)
- ai_envelope = 1/abs(z)**(1./4)
- aip_envelope = abs(zp)**(1./4)
- # Check values
- assert_allclose(ai_zpx, ai_zp, rtol=1e-10)
- assert_allclose(aip_zx, aip_z, rtol=1e-10)
- # Check they are zeros
- assert_allclose(ai_z/ai_envelope, 0, atol=1e-10, rtol=0)
- assert_allclose(aip_zp/aip_envelope, 0, atol=1e-10, rtol=0)
- # Check first zeros, DLMF 9.9.1
- assert_allclose(z[:6],
- [-2.3381074105, -4.0879494441, -5.5205598281,
- -6.7867080901, -7.9441335871, -9.0226508533], rtol=1e-10)
- assert_allclose(zp[:6],
- [-1.0187929716, -3.2481975822, -4.8200992112,
- -6.1633073556, -7.3721772550, -8.4884867340], rtol=1e-10)
- @pytest.mark.fail_slow(5)
- def test_bi_zeros_big(self):
- z, zp, bi_zpx, bip_zx = special.bi_zeros(50000)
- _, _, bi_z, bip_z = special.airy(z)
- _, _, bi_zp, bip_zp = special.airy(zp)
- bi_envelope = 1/abs(z)**(1./4)
- bip_envelope = abs(zp)**(1./4)
- # Check values
- assert_allclose(bi_zpx, bi_zp, rtol=1e-10)
- assert_allclose(bip_zx, bip_z, rtol=1e-10)
- # Check they are zeros
- assert_allclose(bi_z/bi_envelope, 0, atol=1e-10, rtol=0)
- assert_allclose(bip_zp/bip_envelope, 0, atol=1e-10, rtol=0)
- # Check first zeros, DLMF 9.9.2
- assert_allclose(z[:6],
- [-1.1737132227, -3.2710933028, -4.8307378417,
- -6.1698521283, -7.3767620794, -8.4919488465], rtol=1e-10)
- assert_allclose(zp[:6],
- [-2.2944396826, -4.0731550891, -5.5123957297,
- -6.7812944460, -7.9401786892, -9.0195833588], rtol=1e-10)
- class TestAssocLaguerre:
- def test_assoc_laguerre(self):
- a1 = special.genlaguerre(11,1)
- a2 = special.assoc_laguerre(.2,11,1)
- assert_allclose(a2, a1(.2), atol=1.5e-8, rtol=0)
- a2 = special.assoc_laguerre(1,11,1)
- assert_allclose(a2, a1(1), atol=1.5e-8, rtol=0)
- class TestBesselpoly:
- def test_besselpoly(self):
- pass
- class TestKelvin:
- def test_bei(self):
- mbei = special.bei(2)
- # This may not be exact.
- assert_allclose(mbei, 0.9722916273066613, atol=1.5e-5, rtol=0)
- def test_beip(self):
- mbeip = special.beip(2)
- # This may not be exact.
- assert_allclose(mbeip, 0.91701361338403631, atol=1.5e-5, rtol=0)
- def test_ber(self):
- mber = special.ber(2)
- # This may not be exact.
- assert_allclose(mber, 0.75173418271380821, atol=1.5e-5, rtol=0)
- def test_berp(self):
- mberp = special.berp(2)
- # This may not be exact.
- assert_allclose(mberp, -0.49306712470943909, atol=1.5e-5, rtol=0)
- def test_bei_zeros(self):
- # Abramowitz & Stegun, Table 9.12
- bi = special.bei_zeros(5)
- assert_allclose(bi, array([5.02622,
- 9.45541,
- 13.89349,
- 18.33398,
- 22.77544]),
- atol=1.5e-4, rtol=0)
- def test_beip_zeros(self):
- bip = special.beip_zeros(5)
- assert_allclose(bip, array([3.772673304934953,
- 8.280987849760042,
- 12.742147523633703,
- 17.193431752512542,
- 21.641143941167325]),
- atol=1.5e-8, rtol=0)
- def test_ber_zeros(self):
- ber = special.ber_zeros(5)
- assert_allclose(ber, array([2.84892,
- 7.23883,
- 11.67396,
- 16.11356,
- 20.55463]),
- atol=1.5e-4, rtol=0)
- def test_berp_zeros(self):
- brp = special.berp_zeros(5)
- assert_allclose(brp, array([6.03871,
- 10.51364,
- 14.96844,
- 19.41758,
- 23.86430]),
- atol=1.5e-4, rtol=0)
- def test_kelvin(self):
- mkelv = special.kelvin(2)
- assert_allclose(mkelv, (special.ber(2) + special.bei(2)*1j,
- special.ker(2) + special.kei(2)*1j,
- special.berp(2) + special.beip(2)*1j,
- special.kerp(2) + special.keip(2)*1j),
- atol=1.5e-8, rtol=0)
- def test_kei(self):
- mkei = special.kei(2)
- assert_allclose(mkei, -0.20240006776470432, atol=1.5e-5, rtol=0)
- def test_keip(self):
- mkeip = special.keip(2)
- assert_allclose(mkeip, 0.21980790991960536, atol=1.5e-5, rtol=0)
- def test_ker(self):
- mker = special.ker(2)
- assert_allclose(mker, -0.041664513991509472, atol=1.5e-5, rtol=0)
- def test_kerp(self):
- mkerp = special.kerp(2)
- assert_allclose(mkerp, -0.10660096588105264, atol=1.5e-5, rtol=0)
- def test_kei_zeros(self):
- kei = special.kei_zeros(5)
- assert_allclose(kei, array([3.91467,
- 8.34422,
- 12.78256,
- 17.22314,
- 21.66464]),
- atol=1.5e-4, rtol=0)
- def test_keip_zeros(self):
- keip = special.keip_zeros(5)
- assert_allclose(keip, array([4.93181,
- 9.40405,
- 13.85827,
- 18.30717,
- 22.75379]),
- atol=1.5e-4, rtol=0)
- # numbers come from 9.9 of A&S pg. 381
- def test_kelvin_zeros(self):
- tmp = special.kelvin_zeros(5)
- berz, beiz, kerz, keiz, berpz, beipz, kerpz, keipz = tmp
- assert_allclose(berz, array([2.84892,
- 7.23883,
- 11.67396,
- 16.11356,
- 20.55463]),
- atol=1.5e-4, rtol=0)
- assert_allclose(beiz, array([5.02622,
- 9.45541,
- 13.89349,
- 18.33398,
- 22.77544]),
- atol=1.5e-4, rtol=0)
- assert_allclose(kerz, array([1.71854,
- 6.12728,
- 10.56294,
- 15.00269,
- 19.44382]),
- atol=1.5e-4, rtol=0)
- assert_allclose(keiz, array([3.91467,
- 8.34422,
- 12.78256,
- 17.22314,
- 21.66464]),
- atol=1.5e-4, rtol=0)
- assert_allclose(berpz, array([6.03871,
- 10.51364,
- 14.96844,
- 19.41758,
- 23.86430]),
- atol=1.5e-4, rtol=0)
- assert_allclose(beipz, array([3.77267,
- # table from 1927 had 3.77320
- # but this is more accurate
- 8.28099,
- 12.74215,
- 17.19343,
- 21.64114]),
- atol=1.5e-4, rtol=0)
- assert_allclose(kerpz, array([2.66584,
- 7.17212,
- 11.63218,
- 16.08312,
- 20.53068]),
- atol=1.5e-4, rtol=0)
- assert_allclose(keipz, array([4.93181,
- 9.40405,
- 13.85827,
- 18.30717,
- 22.75379]),
- atol=1.5e-4, rtol=0)
- def test_ker_zeros(self):
- ker = special.ker_zeros(5)
- assert_allclose(ker, array([1.71854,
- 6.12728,
- 10.56294,
- 15.00269,
- 19.44381]),
- atol=1.5e-4, rtol=0)
- def test_kerp_zeros(self):
- kerp = special.kerp_zeros(5)
- assert_allclose(kerp, array([2.66584,
- 7.17212,
- 11.63218,
- 16.08312,
- 20.53068]),
- atol=1.5e-4, rtol=0)
- class TestBernoulli:
- def test_bernoulli(self):
- brn = special.bernoulli(5)
- assert_allclose(brn, array([1.0000,
- -0.5000,
- 0.1667,
- 0.0000,
- -0.0333,
- 0.0000]),
- atol=1.5e-4, rtol=0)
- class TestBeta:
- """
- Test beta and betaln.
- """
- def test_beta(self):
- assert_equal(special.beta(1, 1), 1.0)
- assert_allclose(special.beta(-100.3, 1e-200), special.gamma(1e-200))
- assert_allclose(special.beta(0.0342, 171), 24.070498359873497,
- rtol=1e-13, atol=0)
- bet = special.beta(2, 4)
- betg = (special.gamma(2)*special.gamma(4))/special.gamma(6)
- assert_allclose(bet, betg, rtol=1e-13)
- def test_beta_inf(self):
- assert_(np.isinf(special.beta(-1, 2)))
- def test_betaln(self):
- assert_equal(special.betaln(1, 1), 0.0)
- assert_allclose(special.betaln(-100.3, 1e-200),
- special.gammaln(1e-200))
- assert_allclose(special.betaln(0.0342, 170), 3.1811881124242447,
- rtol=1e-14, atol=0)
- betln = special.betaln(2, 4)
- bet = log(abs(special.beta(2, 4)))
- assert_allclose(betln, bet, rtol=1e-13)
- class TestBetaInc:
- """
- Tests for betainc, betaincinv, betaincc, betainccinv.
- """
- def test_a1_b1(self):
- # betainc(1, 1, x) is x.
- x = np.array([0, 0.25, 1])
- assert_equal(special.betainc(1, 1, x), x)
- assert_equal(special.betaincinv(1, 1, x), x)
- assert_equal(special.betaincc(1, 1, x), 1 - x)
- assert_equal(special.betainccinv(1, 1, x), 1 - x)
- # Nontrivial expected values computed with mpmath:
- # from mpmath import mp
- # mp.dps = 100
- # p = mp.betainc(a, b, 0, x, regularized=True)
- #
- # or, e.g.,
- #
- # p = 0.25
- # a, b = 0.0342, 171
- # x = mp.findroot(
- # lambda t: mp.betainc(a, b, 0, t, regularized=True) - p,
- # (8e-21, 9e-21),
- # solver='anderson',
- # )
- #
- @pytest.mark.parametrize(
- 'a, b, x, p',
- [(2, 4, 0.3138101704556974, 0.5),
- (0.0342, 171.0, 1e-10, 0.552699169018070910641),
- # gh-3761:
- (0.0342, 171, 8.42313169354797e-21, 0.25),
- # gh-4244:
- (0.0002742794749792665, 289206.03125, 1.639984034231756e-56,
- 0.9688708782196045),
- # gh-12796:
- (4, 99997, 0.0001947841578892121, 0.999995)])
- def test_betainc_and_inverses(self, a, b, x, p):
- p1 = special.betainc(a, b, x)
- assert_allclose(p1, p, rtol=1e-15)
- x1 = special.betaincinv(a, b, p)
- assert_allclose(x1, x, rtol=5e-13)
- a1 = special.btdtria(p, b, x)
- assert_allclose(a1, a, rtol=1e-13)
- b1 = special.btdtrib(a, p, x)
- assert_allclose(b1, b, rtol=1e-13)
- # Expected values computed with mpmath:
- # from mpmath import mp
- # mp.dps = 100
- # p = mp.betainc(a, b, x, 1, regularized=True)
- @pytest.mark.parametrize('a, b, x, p',
- [(2.5, 3.0, 0.25, 0.833251953125),
- (7.5, 13.25, 0.375, 0.43298734645560368593),
- (0.125, 7.5, 0.425, 0.0006688257851314237),
- (0.125, 18.0, 1e-6, 0.72982359145096327654),
- (0.125, 18.0, 0.996, 7.2745875538380150586e-46),
- (0.125, 24.0, 0.75, 3.70853404816862016966e-17),
- (16.0, 0.75, 0.99999999975,
- 5.4408759277418629909e-07),
- # gh-4677 (numbers from stackoverflow question):
- (0.4211959643503401, 16939.046996018118,
- 0.000815296167195521, 1e-7)])
- def test_betaincc_betainccinv(self, a, b, x, p):
- p1 = special.betaincc(a, b, x)
- assert_allclose(p1, p, rtol=5e-15)
- x1 = special.betainccinv(a, b, p)
- assert_allclose(x1, x, rtol=8e-15)
- @pytest.mark.parametrize(
- 'a, b, y, ref',
- [(14.208308325339239, 14.208308325339239, 7.703145458496392e-307,
- 8.566004561846704e-23),
- (14.0, 14.5, 1e-280, 2.9343915006642424e-21),
- (3.5, 15.0, 4e-95, 1.3290751429289227e-28),
- (10.0, 1.25, 2e-234, 3.982659092143654e-24),
- (4.0, 99997.0, 5e-88, 3.309800566862242e-27)]
- )
- def test_betaincinv_tiny_y(self, a, b, y, ref):
- # Test with extremely small y values. This test includes
- # a regression test for an issue in the boost code;
- # see https://github.com/boostorg/math/issues/961
- #
- # The reference values were computed with mpmath. For example,
- #
- # from mpmath import mp
- # mp.dps = 1000
- # a = 14.208308325339239
- # p = 7.703145458496392e-307
- # x = mp.findroot(lambda t: mp.betainc(a, a, 0, t,
- # regularized=True) - p,
- # x0=8.566e-23)
- # print(float(x))
- #
- x = special.betaincinv(a, b, y)
- assert_allclose(x, ref, rtol=1e-14)
- @pytest.mark.parametrize('func', [special.betainc, special.betaincinv,
- special.btdtria, special.btdtrib,
- special.betaincc, special.betainccinv])
- @pytest.mark.parametrize('args', [(-1.0, 2, 0.5), (1.5, -2.0, 0.5),
- (1.5, 2.0, -0.3), (1.5, 2.0, 1.1)])
- def test_betainc_domain_errors(self, func, args):
- with special.errstate(domain='raise'):
- with pytest.raises(special.SpecialFunctionError, match='domain'):
- func(*args)
- @pytest.mark.parametrize(
- "args,expected",
- [
- ((0.0, 0.0, 0.0), np.nan),
- ((0.0, 0.0, 0.5), np.nan),
- ((0.0, 0.0, 1.0), np.nan),
- ((np.inf, np.inf, 0.0), np.nan),
- ((np.inf, np.inf, 0.5), np.nan),
- ((np.inf, np.inf, 1.0), np.nan),
- ((0.0, 1.0, 0.0), 0.0),
- ((0.0, 1.0, 0.5), 1.0),
- ((0.0, 1.0, 1.0), 1.0),
- ((1.0, 0.0, 0.0), 0.0),
- ((1.0, 0.0, 0.5), 0.0),
- ((1.0, 0.0, 1.0), 1.0),
- ((0.0, np.inf, 0.0), 0.0),
- ((0.0, np.inf, 0.5), 1.0),
- ((0.0, np.inf, 1.0), 1.0),
- ((np.inf, 0.0, 0.0), 0.0),
- ((np.inf, 0.0, 0.5), 0.0),
- ((np.inf, 0.0, 1.0), 1.0),
- ((1.0, np.inf, 0.0), 0.0),
- ((1.0, np.inf, 0.5), 1.0),
- ((1.0, np.inf, 1.0), 1.0),
- ((np.inf, 1.0, 0.0), 0.0),
- ((np.inf, 1.0, 0.5), 0.0),
- ((np.inf, 1.0, 1.0), 1.0),
- ]
- )
- def test_betainc_edge_cases(self, args, expected):
- observed = special.betainc(*args)
- assert_equal(observed, expected)
- @pytest.mark.parametrize(
- "args,expected",
- [
- ((0.0, 0.0, 0.0), np.nan),
- ((0.0, 0.0, 0.5), np.nan),
- ((0.0, 0.0, 1.0), np.nan),
- ((np.inf, np.inf, 0.0), np.nan),
- ((np.inf, np.inf, 0.5), np.nan),
- ((np.inf, np.inf, 1.0), np.nan),
- ((0.0, 1.0, 0.0), 1.0),
- ((0.0, 1.0, 0.5), 0.0),
- ((0.0, 1.0, 1.0), 0.0),
- ((1.0, 0.0, 0.0), 1.0),
- ((1.0, 0.0, 0.5), 1.0),
- ((1.0, 0.0, 1.0), 0.0),
- ((0.0, np.inf, 0.0), 1.0),
- ((0.0, np.inf, 0.5), 0.0),
- ((0.0, np.inf, 1.0), 0.0),
- ((np.inf, 0.0, 0.0), 1.0),
- ((np.inf, 0.0, 0.5), 1.0),
- ((np.inf, 0.0, 1.0), 0.0),
- ((1.0, np.inf, 0.0), 1.0),
- ((1.0, np.inf, 0.5), 0.0),
- ((1.0, np.inf, 1.0), 0.0),
- ((np.inf, 1.0, 0.0), 1.0),
- ((np.inf, 1.0, 0.5), 1.0),
- ((np.inf, 1.0, 1.0), 0.0),
- ]
- )
- def test_betaincc_edge_cases(self, args, expected):
- observed = special.betaincc(*args)
- assert_equal(observed, expected)
- @pytest.mark.parametrize('dtype', [np.float32, np.float64])
- def test_gh21426(self, dtype):
- # Test for gh-21426: betaincinv must not return NaN
- a = np.array([5.], dtype=dtype)
- x = np.array([0.5], dtype=dtype)
- result = special.betaincinv(a, a, x)
- assert_allclose(result, x, rtol=10 * np.finfo(dtype).eps)
- @pytest.mark.parametrize("dtype, rtol",
- [(np.float32, 1e-4),
- (np.float64, 1e-15)])
- @pytest.mark.parametrize("a, b, x, reference",
- [(1e-20, 1e-21, 0.5, 0.0909090909090909),
- (1e-15, 1e-16, 0.5, 0.09090909090909091)])
- def test_gh22682(self, a, b, x, reference, dtype, rtol):
- # gh-22682: betainc returned incorrect results for tiny
- # single precision inputs. test that this is resolved
- a = np.array(a, dtype=dtype)
- b = np.array(b, dtype=dtype)
- x = np.array(x, dtype=dtype)
- res = special.betainc(a, b, x)
- assert_allclose(res, reference, rtol=rtol)
- class TestCombinatorics:
- def test_comb(self):
- assert_allclose(special.comb([10, 10], [3, 4]), [120., 210.])
- assert_allclose(special.comb(10, 3), 120.)
- assert_equal(special.comb(10, 3, exact=True), 120)
- assert_equal(special.comb(10, 3, exact=True, repetition=True), 220)
- assert_allclose([special.comb(20, k, exact=True) for k in range(21)],
- special.comb(20, list(range(21))), atol=1e-15)
- ii = np.iinfo(int).max + 1
- assert_equal(special.comb(ii, ii-1, exact=True), ii)
- expected = 100891344545564193334812497256
- assert special.comb(100, 50, exact=True) == expected
- def test_comb_with_np_int64(self):
- n = 70
- k = 30
- np_n = np.int64(n)
- np_k = np.int64(k)
- res_np = special.comb(np_n, np_k, exact=True)
- res_py = special.comb(n, k, exact=True)
- assert res_np == res_py
- def test_comb_zeros(self):
- assert_equal(special.comb(2, 3, exact=True), 0)
- assert_equal(special.comb(-1, 3, exact=True), 0)
- assert_equal(special.comb(2, -1, exact=True), 0)
- assert_equal(special.comb(2, -1, exact=False), 0)
- assert_allclose(special.comb([2, -1, 2, 10], [3, 3, -1, 3]), [0., 0., 0., 120.])
- def test_comb_exact_non_int_error(self):
- msg = "`exact=True`"
- with pytest.raises(ValueError, match=msg):
- special.comb(3.4, 4, exact=True)
- with pytest.raises(ValueError, match=msg):
- special.comb(3, 4.4, exact=True)
- @pytest.mark.parametrize('N', [0, 5, 10])
- @pytest.mark.parametrize('exact', [True, False])
- def test_comb_repetition_k_zero(self, N, exact):
- # Regression test for gh-23867
- # C(n, 0) should always be 1 for n >= 0, regardless of repetition
- actual = special.comb(N, 0, exact=exact, repetition=True)
- assert actual == 1
- assert type(actual) is int if exact else np.float64
- def test_comb_repetition_k_zero_array(self):
- # Test array-like input with exact=False for gh-23867
- N = np.array([0, 5, 10])
- result = special.comb(N, 0, exact=False, repetition=True)
- expected = np.array([1.0, 1.0, 1.0])
- assert_equal(result, expected)
- def test_perm(self):
- assert_allclose(special.perm([10, 10], [3, 4]), [720., 5040.])
- assert_allclose(special.perm(10, 3), 720., atol=1.5e-7, rtol=0)
- assert_equal(special.perm(10, 3, exact=True), 720)
- def test_perm_zeros(self):
- assert_equal(special.perm(2, 3, exact=True), 0)
- assert_equal(special.perm(-1, 3, exact=True), 0)
- assert_equal(special.perm(2, -1, exact=True), 0)
- assert_equal(special.perm(2, -1, exact=False), 0)
- assert_allclose(special.perm([2, -1, 2, 10], [3, 3, -1, 3]), [0., 0., 0., 720.])
- def test_perm_iv(self):
- # currently `exact=True` only support scalars
- with pytest.raises(ValueError, match="scalar integers"):
- special.perm([1, 2], [4, 5], exact=True)
- with pytest.raises(ValueError, match="Non-integer"):
- special.perm(4.6, 6, exact=True)
- with pytest.raises(ValueError, match="Non-integer"):
- special.perm(-4.6, 3, exact=True)
- with pytest.raises(ValueError, match="Non-integer"):
- special.perm(4, -3.9, exact=True)
- with pytest.raises(ValueError, match="Non-integer"):
- special.perm(6.0, 4.6, exact=True)
- class TestTrigonometric:
- def test_cbrt(self):
- cb = special.cbrt(27)
- cbrl = 27**(1.0/3.0)
- assert_allclose(cb, cbrl, atol=1.5e-7, rtol=0)
- def test_cbrtmore(self):
- cb1 = special.cbrt(27.9)
- cbrl1 = 27.9**(1.0/3.0)
- assert_allclose(cb1, cbrl1, atol=1.5e-8, rtol=0)
- def test_cosdg(self):
- cdg = special.cosdg(90)
- cdgrl = cos(pi/2.0)
- assert_allclose(cdg, cdgrl, atol=1.5e-8, rtol=0)
- def test_cosdgmore(self):
- cdgm = special.cosdg(30)
- cdgmrl = cos(pi/6.0)
- assert_allclose(cdgm, cdgmrl, atol=1.5e-8, rtol=0)
- def test_cosm1(self):
- cs = (special.cosm1(0),special.cosm1(.3),special.cosm1(pi/10))
- csrl = (cos(0)-1,cos(.3)-1,cos(pi/10)-1)
- assert_allclose(cs, csrl, atol=1.5e-8, rtol=0)
- def test_cotdg(self):
- ct = special.cotdg(30)
- ctrl = tan(pi/6.0)**(-1)
- assert_allclose(ct, ctrl, atol=1.5e-8, rtol=0)
- def test_cotdgmore(self):
- ct1 = special.cotdg(45)
- ctrl1 = tan(pi/4.0)**(-1)
- assert_allclose(ct1, ctrl1, atol=1.5e-8, rtol=0)
- def test_specialpoints(self):
- assert_allclose(special.cotdg(45), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-45), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(90), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-90), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(135), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-135), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(225), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-225), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(270), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-270), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(315), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(-315), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.cotdg(765), 1.0, atol=1.5e-14, rtol=0)
- def test_sinc(self):
- # the sinc implementation and more extensive sinc tests are in numpy
- assert_array_equal(special.sinc([0]), 1)
- assert_equal(special.sinc(0.0), 1.0)
- def test_sindg(self):
- sn = special.sindg(90)
- assert_equal(sn,1.0)
- def test_sindgmore(self):
- snm = special.sindg(30)
- snmrl = sin(pi/6.0)
- assert_allclose(snm, snmrl, atol=1.5e-8, rtol=0)
- snm1 = special.sindg(45)
- snmrl1 = sin(pi/4.0)
- assert_allclose(snm1, snmrl1, atol=1.5e-8, rtol=0)
- class TestTandg:
- def test_tandg(self):
- tn = special.tandg(30)
- tnrl = tan(pi/6.0)
- assert_allclose(tn, tnrl, atol=1.5e-8, rtol=0)
- def test_tandgmore(self):
- tnm = special.tandg(45)
- tnmrl = tan(pi/4.0)
- assert_allclose(tnm, tnmrl, atol=1.5e-8, rtol=0)
- tnm1 = special.tandg(60)
- tnmrl1 = tan(pi/3.0)
- assert_allclose(tnm1, tnmrl1, atol=1.5e-8, rtol=0)
- def test_specialpoints(self):
- assert_allclose(special.tandg(0), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(45), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(-45), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(135), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(-135), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(180), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(-180), 0.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(225), 1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(-225), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(315), -1.0, atol=1.5e-14, rtol=0)
- assert_allclose(special.tandg(-315), 1.0, atol=1.5e-14, rtol=0)
- class TestEllip:
- def test_ellipj_nan(self):
- """Regression test for #912."""
- special.ellipj(0.5, np.nan)
- def test_ellipj(self):
- el = special.ellipj(0.2,0)
- rel = [sin(0.2),cos(0.2),1.0,0.20]
- assert_allclose(el, rel, atol=1.5e-13, rtol=0)
- def test_ellipk(self):
- elk = special.ellipk(.2)
- assert_allclose(elk, 1.659623598610528, atol=1.5e-11, rtol=0)
- assert_equal(special.ellipkm1(0.0), np.inf)
- assert_equal(special.ellipkm1(1.0), pi/2)
- assert_equal(special.ellipkm1(np.inf), 0.0)
- assert_equal(special.ellipkm1(np.nan), np.nan)
- assert_equal(special.ellipkm1(-1), np.nan)
- assert_allclose(special.ellipk(-10), 0.7908718902387385)
- def test_ellipkinc(self):
- elkinc = special.ellipkinc(pi/2,.2)
- elk = special.ellipk(0.2)
- assert_allclose(elkinc, elk, atol=1.5e-15, rtol=0)
- alpha = 20*pi/180
- phi = 45*pi/180
- m = sin(alpha)**2
- elkinc = special.ellipkinc(phi,m)
- assert_allclose(elkinc, 0.79398143, atol=1.5e-8, rtol=0)
- # From pg. 614 of A & S
- assert_equal(special.ellipkinc(pi/2, 0.0), pi/2)
- assert_equal(special.ellipkinc(pi/2, 1.0), np.inf)
- assert_equal(special.ellipkinc(pi/2, -np.inf), 0.0)
- assert_equal(special.ellipkinc(pi/2, np.nan), np.nan)
- assert_equal(special.ellipkinc(pi/2, 2), np.nan)
- assert_equal(special.ellipkinc(0, 0.5), 0.0)
- assert_equal(special.ellipkinc(np.inf, 0.5), np.inf)
- assert_equal(special.ellipkinc(-np.inf, 0.5), -np.inf)
- assert_equal(special.ellipkinc(np.inf, np.inf), np.nan)
- assert_equal(special.ellipkinc(np.inf, -np.inf), np.nan)
- assert_equal(special.ellipkinc(-np.inf, -np.inf), np.nan)
- assert_equal(special.ellipkinc(-np.inf, np.inf), np.nan)
- assert_equal(special.ellipkinc(np.nan, 0.5), np.nan)
- assert_equal(special.ellipkinc(np.nan, np.nan), np.nan)
- assert_allclose(special.ellipkinc(0.38974112035318718, 1), 0.4, rtol=1e-14)
- assert_allclose(special.ellipkinc(1.5707, -10), 0.79084284661724946)
- def test_ellipkinc_2(self):
- # Regression test for gh-3550
- # ellipkinc(phi, mbad) was NaN and mvals[2:6] were twice the correct value
- mbad = 0.68359375000000011
- phi = 0.9272952180016123
- m = np.nextafter(mbad, 0)
- mvals = []
- for j in range(10):
- mvals.append(m)
- m = np.nextafter(m, 1)
- f = special.ellipkinc(phi, mvals)
- assert_array_almost_equal_nulp(f, np.full_like(f, 1.0259330100195334), 1)
- # this bug also appears at phi + n * pi for at least small n
- f1 = special.ellipkinc(phi + pi, mvals)
- assert_array_almost_equal_nulp(f1, np.full_like(f1, 5.1296650500976675), 2)
- def test_ellipkinc_singular(self):
- # ellipkinc(phi, 1) has closed form and is finite only for phi in (-pi/2, pi/2)
- xlog = np.logspace(-300, -17, 25)
- xlin = np.linspace(1e-17, 0.1, 25)
- xlin2 = np.linspace(0.1, pi/2, 25, endpoint=False)
- assert_allclose(special.ellipkinc(xlog, 1), np.arcsinh(np.tan(xlog)),
- rtol=1e14)
- assert_allclose(special.ellipkinc(xlin, 1), np.arcsinh(np.tan(xlin)),
- rtol=1e14)
- assert_allclose(special.ellipkinc(xlin2, 1), np.arcsinh(np.tan(xlin2)),
- rtol=1e14)
- assert_equal(special.ellipkinc(np.pi/2, 1), np.inf)
- assert_allclose(special.ellipkinc(-xlog, 1), np.arcsinh(np.tan(-xlog)),
- rtol=1e14)
- assert_allclose(special.ellipkinc(-xlin, 1), np.arcsinh(np.tan(-xlin)),
- rtol=1e14)
- assert_allclose(special.ellipkinc(-xlin2, 1), np.arcsinh(np.tan(-xlin2)),
- rtol=1e14)
- assert_equal(special.ellipkinc(-np.pi/2, 1), np.inf)
- def test_ellipe(self):
- ele = special.ellipe(.2)
- assert_allclose(ele, 1.4890350580958529, atol=1.5e-8, rtol=0)
- assert_equal(special.ellipe(0.0), pi/2)
- assert_equal(special.ellipe(1.0), 1.0)
- assert_equal(special.ellipe(-np.inf), np.inf)
- assert_equal(special.ellipe(np.nan), np.nan)
- assert_equal(special.ellipe(2), np.nan)
- assert_allclose(special.ellipe(-10), 3.6391380384177689)
- def test_ellipeinc(self):
- eleinc = special.ellipeinc(pi/2,.2)
- ele = special.ellipe(0.2)
- assert_allclose(eleinc, ele, atol=1.5e-14, rtol=0)
- # pg 617 of A & S
- alpha, phi = 52*pi/180,35*pi/180
- m = sin(alpha)**2
- eleinc = special.ellipeinc(phi,m)
- assert_allclose(eleinc, 0.58823065, atol=1.5e-8, rtol=0)
- assert_equal(special.ellipeinc(pi/2, 0.0), pi/2)
- assert_equal(special.ellipeinc(pi/2, 1.0), 1.0)
- assert_equal(special.ellipeinc(pi/2, -np.inf), np.inf)
- assert_equal(special.ellipeinc(pi/2, np.nan), np.nan)
- assert_equal(special.ellipeinc(pi/2, 2), np.nan)
- assert_equal(special.ellipeinc(0, 0.5), 0.0)
- assert_equal(special.ellipeinc(np.inf, 0.5), np.inf)
- assert_equal(special.ellipeinc(-np.inf, 0.5), -np.inf)
- assert_equal(special.ellipeinc(np.inf, -np.inf), np.inf)
- assert_equal(special.ellipeinc(-np.inf, -np.inf), -np.inf)
- assert_equal(special.ellipeinc(np.inf, np.inf), np.nan)
- assert_equal(special.ellipeinc(-np.inf, np.inf), np.nan)
- assert_equal(special.ellipeinc(np.nan, 0.5), np.nan)
- assert_equal(special.ellipeinc(np.nan, np.nan), np.nan)
- assert_allclose(special.ellipeinc(1.5707, -10), 3.6388185585822876)
- def test_ellipeinc_2(self):
- # Regression test for gh-3550
- # ellipeinc(phi, mbad) was NaN and mvals[2:6] were twice the correct value
- mbad = 0.68359375000000011
- phi = 0.9272952180016123
- m = np.nextafter(mbad, 0)
- mvals = []
- for j in range(10):
- mvals.append(m)
- m = np.nextafter(m, 1)
- f = special.ellipeinc(phi, mvals)
- assert_array_almost_equal_nulp(f, np.full_like(f, 0.84442884574781019), 2)
- # this bug also appears at phi + n * pi for at least small n
- f1 = special.ellipeinc(phi + pi, mvals)
- assert_array_almost_equal_nulp(f1, np.full_like(f1, 3.3471442287390509), 4)
- class TestEllipCarlson:
- """Test for Carlson elliptic integrals ellipr[cdfgj].
- The special values used in these tests can be found in Sec. 3 of Carlson
- (1994), https://arxiv.org/abs/math/9409227
- """
- def test_elliprc(self):
- assert_allclose(elliprc(1, 1), 1)
- assert elliprc(1, inf) == 0.0
- assert isnan(elliprc(1, 0))
- assert elliprc(1, complex(1, inf)) == 0.0
- args = array([[0.0, 0.25],
- [2.25, 2.0],
- [0.0, 1.0j],
- [-1.0j, 1.0j],
- [0.25, -2.0],
- [1.0j, -1.0]])
- expected_results = array([np.pi,
- np.log(2.0),
- 1.1107207345396 * (1.0-1.0j),
- 1.2260849569072-0.34471136988768j,
- np.log(2.0) / 3.0,
- 0.77778596920447+0.19832484993429j])
- for i, arr in enumerate(args):
- assert_allclose(elliprc(*arr), expected_results[i])
- def test_elliprd(self):
- assert_allclose(elliprd(1, 1, 1), 1)
- assert_allclose(elliprd(0, 2, 1) / 3.0, 0.59907011736779610371)
- assert elliprd(1, 1, inf) == 0.0
- assert np.isinf(elliprd(1, 1, 0))
- assert np.isinf(elliprd(1, 1, complex(0, 0)))
- assert np.isinf(elliprd(0, 1, complex(0, 0)))
- assert isnan(elliprd(1, 1, -np.finfo(np.float64).tiny / 2.0))
- assert isnan(elliprd(1, 1, complex(-1, 0)))
- args = array([[0.0, 2.0, 1.0],
- [2.0, 3.0, 4.0],
- [1.0j, -1.0j, 2.0],
- [0.0, 1.0j, -1.0j],
- [0.0, -1.0+1.0j, 1.0j],
- [-2.0-1.0j, -1.0j, -1.0+1.0j]])
- expected_results = array([1.7972103521034,
- 0.16510527294261,
- 0.65933854154220,
- 1.2708196271910+2.7811120159521j,
- -1.8577235439239-0.96193450888839j,
- 1.8249027393704-1.2218475784827j])
- for i, arr in enumerate(args):
- assert_allclose(elliprd(*arr), expected_results[i])
- def test_elliprf(self):
- assert_allclose(elliprf(1, 1, 1), 1)
- assert_allclose(elliprf(0, 1, 2), 1.31102877714605990523)
- assert elliprf(1, inf, 1) == 0.0
- assert np.isinf(elliprf(0, 1, 0))
- assert isnan(elliprf(1, 1, -1))
- assert elliprf(complex(inf), 0, 1) == 0.0
- assert isnan(elliprf(1, 1, complex(-inf, 1)))
- args = array([[1.0, 2.0, 0.0],
- [1.0j, -1.0j, 0.0],
- [0.5, 1.0, 0.0],
- [-1.0+1.0j, 1.0j, 0.0],
- [2.0, 3.0, 4.0],
- [1.0j, -1.0j, 2.0],
- [-1.0+1.0j, 1.0j, 1.0-1.0j]])
- expected_results = array([1.3110287771461,
- 1.8540746773014,
- 1.8540746773014,
- 0.79612586584234-1.2138566698365j,
- 0.58408284167715,
- 1.0441445654064,
- 0.93912050218619-0.53296252018635j])
- for i, arr in enumerate(args):
- assert_allclose(elliprf(*arr), expected_results[i])
- def test_elliprg(self):
- assert_allclose(elliprg(1, 1, 1), 1)
- assert_allclose(elliprg(0, 0, 1), 0.5)
- assert_allclose(elliprg(0, 0, 0), 0)
- assert np.isinf(elliprg(1, inf, 1))
- assert np.isinf(elliprg(complex(inf), 1, 1))
- args = array([[0.0, 16.0, 16.0],
- [2.0, 3.0, 4.0],
- [0.0, 1.0j, -1.0j],
- [-1.0+1.0j, 1.0j, 0.0],
- [-1.0j, -1.0+1.0j, 1.0j],
- [0.0, 0.0796, 4.0]])
- expected_results = array([np.pi,
- 1.7255030280692,
- 0.42360654239699,
- 0.44660591677018+0.70768352357515j,
- 0.36023392184473+0.40348623401722j,
- 1.0284758090288])
- for i, arr in enumerate(args):
- assert_allclose(elliprg(*arr), expected_results[i])
- def test_elliprj(self):
- assert_allclose(elliprj(1, 1, 1, 1), 1)
- assert elliprj(1, 1, inf, 1) == 0.0
- assert isnan(elliprj(1, 0, 0, 0))
- assert isnan(elliprj(-1, 1, 1, 1))
- assert elliprj(1, 1, 1, inf) == 0.0
- args = array([[0.0, 1.0, 2.0, 3.0],
- [2.0, 3.0, 4.0, 5.0],
- [2.0, 3.0, 4.0, -1.0+1.0j],
- [1.0j, -1.0j, 0.0, 2.0],
- [-1.0+1.0j, -1.0-1.0j, 1.0, 2.0],
- [1.0j, -1.0j, 0.0, 1.0-1.0j],
- [-1.0+1.0j, -1.0-1.0j, 1.0, -3.0+1.0j],
- [2.0, 3.0, 4.0, -0.5], # Cauchy principal value
- [2.0, 3.0, 4.0, -5.0]]) # Cauchy principal value
- expected_results = array([0.77688623778582,
- 0.14297579667157,
- 0.13613945827771-0.38207561624427j,
- 1.6490011662711,
- 0.94148358841220,
- 1.8260115229009+1.2290661908643j,
- -0.61127970812028-1.0684038390007j,
- 0.24723819703052, # Cauchy principal value
- -0.12711230042964]) # Caucny principal value
- for i, arr in enumerate(args):
- assert_allclose(elliprj(*arr), expected_results[i])
- @pytest.mark.xfail(reason="Insufficient accuracy on 32-bit")
- def test_elliprj_hard(self):
- assert_allclose(elliprj(6.483625725195452e-08,
- 1.1649136528196886e-27,
- 3.6767340167168e+13,
- 0.493704617023468),
- 8.63426920644241857617477551054e-6,
- rtol=5e-15, atol=1e-20)
- assert_allclose(elliprj(14.375105857849121,
- 9.993988969725365e-11,
- 1.72844262269944e-26,
- 5.898871222598245e-06),
- 829774.1424801627252574054378691828,
- rtol=5e-15, atol=1e-20)
- class TestEllipLegendreCarlsonIdentities:
- """Test identities expressing the Legendre elliptic integrals in terms
- of Carlson's symmetric integrals. These identities can be found
- in the DLMF https://dlmf.nist.gov/19.25#i .
- """
- def setup_class(self):
- self.m_n1_1 = np.arange(-1., 1., 0.01)
- # For double, this is -(2**1024)
- self.max_neg = finfo(double).min
- # Lots of very negative numbers
- self.very_neg_m = -1. * 2.**arange(-1 +
- np.log2(-self.max_neg), 0.,
- -1.)
- self.ms_up_to_1 = np.concatenate(([self.max_neg],
- self.very_neg_m,
- self.m_n1_1))
- def test_k(self):
- """Test identity:
- K(m) = R_F(0, 1-m, 1)
- """
- m = self.ms_up_to_1
- assert_allclose(ellipk(m), elliprf(0., 1.-m, 1.))
- def test_km1(self):
- """Test identity:
- K(m) = R_F(0, 1-m, 1)
- But with the ellipkm1 function
- """
- # For double, this is 2**-1022
- tiny = finfo(double).tiny
- # All these small powers of 2, up to 2**-1
- m1 = tiny * 2.**arange(0., -np.log2(tiny))
- assert_allclose(ellipkm1(m1), elliprf(0., m1, 1.))
- def test_e(self):
- """Test identity:
- E(m) = 2*R_G(0, 1-k^2, 1)
- """
- m = self.ms_up_to_1
- assert_allclose(ellipe(m), 2.*elliprg(0., 1.-m, 1.))
- class TestErf:
- def test_erf(self):
- er = special.erf(.25)
- assert_allclose(er, 0.2763263902, atol=1.5e-8, rtol=0)
- def test_erf_zeros(self):
- erz = special.erf_zeros(5)
- erzr = array([1.45061616+1.88094300j,
- 2.24465928+2.61657514j,
- 2.83974105+3.17562810j,
- 3.33546074+3.64617438j,
- 3.76900557+4.06069723j])
- assert_allclose(erz, erzr, atol=1.5e-4, rtol=0)
- def _check_variant_func(self, func, other_func, rtol, atol=0):
- rng = np.random.RandomState(1234)
- n = 10000
- x = rng.pareto(0.02, n) * (2*rng.randint(0, 2, n) - 1)
- y = rng.pareto(0.02, n) * (2*rng.randint(0, 2, n) - 1)
- z = x + 1j*y
- with np.errstate(all='ignore'):
- w = other_func(z)
- w_real = other_func(x).real
- mask = np.isfinite(w)
- w = w[mask]
- z = z[mask]
- mask = np.isfinite(w_real)
- w_real = w_real[mask]
- x = x[mask]
- # test both real and complex variants
- assert_func_equal(func, w, z, rtol=rtol, atol=atol)
- assert_func_equal(func, w_real, x, rtol=rtol, atol=atol)
- def test_erfc_consistent(self):
- self._check_variant_func(
- cephes.erfc,
- lambda z: 1 - cephes.erf(z),
- rtol=1e-12,
- atol=1e-14 # <- the test function loses precision
- )
- def test_erfcx_consistent(self):
- self._check_variant_func(
- cephes.erfcx,
- lambda z: np.exp(z*z) * cephes.erfc(z),
- rtol=1e-12
- )
- def test_erfi_consistent(self):
- self._check_variant_func(
- cephes.erfi,
- lambda z: -1j * cephes.erf(1j*z),
- rtol=1e-12
- )
- def test_dawsn_consistent(self):
- self._check_variant_func(
- cephes.dawsn,
- lambda z: sqrt(pi)/2 * np.exp(-z*z) * cephes.erfi(z),
- rtol=1e-12
- )
- def test_erf_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan, -1, 1]
- assert_allclose(special.erf(vals), expected, rtol=1e-15)
- def test_erfc_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan, 2, 0]
- assert_allclose(special.erfc(vals), expected, rtol=1e-15)
- def test_erfcx_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan, np.inf, 0]
- assert_allclose(special.erfcx(vals), expected, rtol=1e-15)
- def test_erfi_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan, -np.inf, np.inf]
- assert_allclose(special.erfi(vals), expected, rtol=1e-15)
- def test_dawsn_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan, -0.0, 0.0]
- assert_allclose(special.dawsn(vals), expected, rtol=1e-15)
- def test_wofz_nan_inf(self):
- vals = [np.nan, -np.inf, np.inf]
- expected = [np.nan + np.nan * 1.j, 0.-0.j, 0.+0.j]
- assert_allclose(special.wofz(vals), expected, rtol=1e-15)
- class TestEuler:
- def test_euler(self):
- eu0 = special.euler(0)
- eu1 = special.euler(1)
- eu2 = special.euler(2) # just checking segfaults
- assert_allclose(eu0, [1], rtol=1e-15)
- assert_allclose(eu1, [1, 0], rtol=1e-15)
- assert_allclose(eu2, [1, 0, -1], rtol=1e-15)
- eu24 = special.euler(24)
- mathworld = [1,1,5,61,1385,50521,2702765,199360981,
- 19391512145,2404879675441,
- 370371188237525,69348874393137901,
- 15514534163557086905]
- correct = zeros((25,),'d')
- for k in range(0,13):
- if (k % 2):
- correct[2*k] = -float(mathworld[k])
- else:
- correct[2*k] = float(mathworld[k])
- with np.errstate(all='ignore'):
- err = nan_to_num((eu24-correct)/correct)
- errmax = max(err)
- assert_allclose(errmax, 0.0, atol=1.5e-14, rtol=0)
- class TestExp:
- def test_exp2(self):
- ex = special.exp2(2)
- exrl = 2**2
- assert_equal(ex,exrl)
- def test_exp2more(self):
- exm = special.exp2(2.5)
- exmrl = 2**(2.5)
- assert_allclose(exm, exmrl, atol=1.5e-8, rtol=0)
- def test_exp10(self):
- ex = special.exp10(2)
- exrl = 10**2
- assert_allclose(ex, exrl, atol=1e-6, rtol=0)
- def test_exp10more(self):
- exm = special.exp10(2.5)
- exmrl = 10**(2.5)
- assert_allclose(exm, exmrl, atol=1.5e-8, rtol=0)
- def test_expm1(self):
- ex = (special.expm1(2), special.expm1(3), special.expm1(4))
- exrl = (exp(2) - 1, exp(3) - 1, exp(4) - 1)
- assert_allclose(ex, exrl, atol=1.5e-8, rtol=0)
- def test_expm1more(self):
- ex1 = (special.expm1(2), special.expm1(2.1), special.expm1(2.2))
- exrl1 = (exp(2) - 1, exp(2.1) - 1, exp(2.2) - 1)
- assert_allclose(ex1, exrl1, atol=1.5e-8, rtol=0)
- def assert_really_equal(x, y, rtol=None):
- """
- Sharper assertion function that is stricter about matching types, not just values
- This is useful/necessary in some cases:
- * dtypes for arrays that have the same _values_ (e.g. element 1.0 vs 1)
- * distinguishing complex from real NaN
- * result types for scalars
- We still want to be able to allow a relative tolerance for the values though.
- The main logic comparison logic is handled by the xp_assert_* functions.
- """
- def assert_func(x, y):
- xp_assert_equal(x, y) if rtol is None else xp_assert_close(x, y, rtol=rtol)
- def assert_complex_nan(x):
- assert np.isnan(x.real) and np.isnan(x.imag)
- assert type(x) is type(y), f"types not equal: {type(x)}, {type(y)}"
- # ensure we also compare the values _within_ an array appropriately,
- # e.g. assert_equal does not distinguish different complex nans in arrays
- if isinstance(x, np.ndarray):
- # assert_equal does not compare (all) types, only values
- assert x.dtype == y.dtype
- # for empty arrays resp. to ensure shapes match
- assert_func(x, y)
- for elem_x, elem_y in zip(x.ravel(), y.ravel()):
- assert_really_equal(elem_x, elem_y, rtol=rtol)
- elif np.isnan(x) and np.isnan(y) and _is_subdtype(type(x), "c"):
- assert_complex_nan(x) and assert_complex_nan(y)
- # no need to consider complex infinities due to numpy/numpy#25493
- else:
- assert_func(x, y)
- class TestFactorialFunctions:
- def factorialk_ref(self, n, k, exact, extend):
- if exact:
- return special.factorialk(n, k=k, exact=True)
- # for details / explanation see factorialk-docstring
- r = np.mod(n, k) if extend == "zero" else 1
- vals = np.power(k, (n - r)/k) * special.gamma(n/k + 1) * special.rgamma(r/k + 1)
- # np.maximum is element-wise, which is what we want
- return vals * np.maximum(r, 1)
- @pytest.mark.parametrize("exact,extend",
- [(True, "zero"), (False, "zero"), (False, "complex")])
- def test_factorialx_scalar_return_type(self, exact, extend):
- kw = {"exact": exact, "extend": extend}
- assert np.isscalar(special.factorial(1, **kw))
- assert np.isscalar(special.factorial2(1, **kw))
- assert np.isscalar(special.factorialk(1, k=3, **kw))
- @pytest.mark.parametrize("n", [-1, -2, -3])
- @pytest.mark.parametrize("exact", [True, False])
- def test_factorialx_negative_extend_zero(self, exact, n):
- kw = {"exact": exact}
- assert_equal(special.factorial(n, **kw), 0)
- assert_equal(special.factorial2(n, **kw), 0)
- assert_equal(special.factorialk(n, k=3, **kw), 0)
- @pytest.mark.parametrize("exact", [True, False])
- def test_factorialx_negative_extend_zero_array(self, exact):
- kw = {"exact": exact}
- rtol = 1e-15
- n = [-5, -4, 0, 1]
- # Consistent output for n < 0
- expected = np.array([0, 0, 1, 1], dtype=native_int if exact else np.float64)
- assert_really_equal(special.factorial(n, **kw), expected, rtol=rtol)
- assert_really_equal(special.factorial2(n, **kw), expected, rtol=rtol)
- assert_really_equal(special.factorialk(n, k=3, **kw), expected, rtol=rtol)
- @pytest.mark.parametrize("n", [-1.1, -2.2, -3.3])
- def test_factorialx_negative_extend_complex(self, n):
- kw = {"extend": "complex"}
- exp_1 = {-1.1: -10.686287021193184771,
- -2.2: 4.8509571405220931958,
- -3.3: -1.4471073942559181166}
- exp_2 = {-1.1: 1.0725776858167496309,
- -2.2: -3.9777171783768419874,
- -3.3: -0.99588841846200555977}
- exp_k = {-1.1: 0.73565345382163025659,
- -2.2: 1.1749163167190809498,
- -3.3: -2.4780584257450583713}
- rtol = 3e-15
- assert_allclose(special.factorial(n, **kw), exp_1[n], rtol=rtol)
- assert_allclose(special.factorial2(n, **kw), exp_2[n], rtol=rtol)
- assert_allclose(special.factorialk(n, k=3, **kw), exp_k[n], rtol=rtol)
- assert_allclose(special.factorial([n], **kw)[0], exp_1[n], rtol=rtol)
- assert_allclose(special.factorial2([n], **kw)[0], exp_2[n], rtol=rtol)
- assert_allclose(special.factorialk([n], k=3, **kw)[0], exp_k[n], rtol=rtol)
- @pytest.mark.parametrize("imag", [0, 0j])
- @pytest.mark.parametrize("n_outer", [-1, -2, -3])
- def test_factorialx_negative_extend_complex_poles(self, n_outer, imag):
- kw = {"extend": "complex"}
- def _check(n):
- complexify = _is_subdtype(type(n), "c")
- # like for gamma, we expect complex nans for complex inputs
- complex_nan = np.complex128("nan+nanj")
- exp = np.complex128("nan+nanj") if complexify else np.float64("nan")
- # poles are at negative integers that are multiples of k
- assert_really_equal(special.factorial(n, **kw), exp)
- assert_really_equal(special.factorial2(n * 2, **kw), exp)
- assert_really_equal(special.factorialk(n * 3, k=3, **kw), exp)
- # also test complex k for factorialk
- c = 1.5 - 2j
- assert_really_equal(special.factorialk(n * c, k=c, **kw), complex_nan)
- # same for array case
- assert_really_equal(special.factorial([n], **kw)[0], exp)
- assert_really_equal(special.factorial2([n * 2], **kw)[0], exp)
- assert_really_equal(special.factorialk([n * 3], k=3, **kw)[0], exp)
- assert_really_equal(special.factorialk([n * c], k=c, **kw)[0], complex_nan)
- # more specific tests in test_factorial{,2,k}_complex_reference
- # imag ensures we test both real and complex representations of the poles
- _check(n_outer + imag)
- # check for large multiple of period
- _check(100_000 * n_outer + imag)
- @pytest.mark.parametrize("boxed", [True, False])
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize(
- "n",
- [
- np.nan, np.float64("nan"), np.nan + np.nan*1j, np.complex128("nan+nanj"),
- np.inf, np.inf + 0j, -np.inf, -np.inf + 0j, None, np.datetime64("nat")
- ],
- ids=[
- "NaN", "np.float64('nan')", "NaN+i*NaN", "np.complex128('nan+nanj')",
- "inf", "inf+0i", "-inf", "-inf+0i", "None", "NaT"
- ]
- )
- @pytest.mark.parametrize(
- "factorialx",
- [special.factorial, special.factorial2, special.factorialk]
- )
- def test_factorialx_inf_nan(self, factorialx, n, extend, boxed):
- # NaNs not allowed (by dtype) for exact=True
- kw = {"exact": False, "extend": extend}
- if factorialx == special.factorialk:
- kw["k"] = 3
- # None is allowed for scalars, but would cause object type in array case
- permissible_types = ["i", "f", "c"] if boxed else ["i", "f", "c", type(None)]
- # factorial allows floats also for extend="zero"
- types_need_complex_ext = "c" if factorialx == special.factorial else ["f", "c"]
- if not _is_subdtype(type(n), permissible_types):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- factorialx([n] if boxed else n, **kw)
- elif _is_subdtype(type(n), types_need_complex_ext) and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- factorialx([n] if boxed else n, **kw)
- else:
- # account for type and whether extend="complex"
- complexify = (extend == "complex") and _is_subdtype(type(n), "c")
- # note that the type of the naïve `np.nan + np.nan * 1j` is `complex`
- # instead of `numpy.complex128`, which trips up assert_really_equal
- expected = np.complex128("nan+nanj") if complexify else np.float64("nan")
- # the only exception are real infinities
- if _is_subdtype(type(n), "f") and np.isinf(n):
- # unchanged for positive infinity; negative one depends on extension
- neg_inf_result = np.float64(0 if (extend == "zero") else "nan")
- expected = np.float64("inf") if (n > 0) else neg_inf_result
- result = factorialx([n], **kw)[0] if boxed else factorialx(n, **kw)
- assert_really_equal(result, expected)
- # also tested in test_factorial{,2,k}_{array,scalar}_corner_cases
- @pytest.mark.parametrize("extend", [0, 1.1, np.nan, "string"])
- def test_factorialx_raises_extend(self, extend):
- with pytest.raises(ValueError, match="argument `extend` must be.*"):
- special.factorial(1, extend=extend)
- with pytest.raises(ValueError, match="argument `extend` must be.*"):
- special.factorial2(1, extend=extend)
- with pytest.raises(ValueError, match="argument `extend` must be.*"):
- special.factorialk(1, k=3, exact=True, extend=extend)
- @pytest.mark.parametrize("levels", range(1, 5))
- @pytest.mark.parametrize("exact", [True, False])
- def test_factorialx_array_shape(self, levels, exact):
- def _nest_me(x, k=1):
- """
- Double x and nest it k times
- For example:
- >>> _nest_me([3, 4], 2)
- [[[3, 4], [3, 4]], [[3, 4], [3, 4]]]
- """
- if k == 0:
- return x
- else:
- return _nest_me([x, x], k-1)
- def _check(res, nucleus):
- exp = np.array(_nest_me(nucleus, k=levels), dtype=object)
- # test that ndarray shape is maintained
- # need to cast to float due to numpy/numpy#21220
- assert_allclose(res.astype(np.float64), exp.astype(np.float64))
- n = np.array(_nest_me([5, 25], k=levels))
- exp_nucleus = {1: [120, math.factorial(25)],
- # correctness of factorial{2,k}() is tested elsewhere
- 2: [15, special.factorial2(25, exact=True)],
- 3: [10, special.factorialk(25, 3, exact=True)]}
- _check(special.factorial(n, exact=exact), exp_nucleus[1])
- _check(special.factorial2(n, exact=exact), exp_nucleus[2])
- _check(special.factorialk(n, 3, exact=exact), exp_nucleus[3])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("dtype", [
- None, int, np.int8, np.int16, np.int32, np.int64,
- np.uint8, np.uint16, np.uint32, np.uint64
- ])
- @pytest.mark.parametrize("dim", range(0, 5))
- def test_factorialx_array_dimension(self, dim, dtype, exact):
- n = np.array(5, dtype=dtype, ndmin=dim)
- exp = {1: 120, 2: 15, 3: 10}
- assert_allclose(special.factorial(n, exact=exact),
- np.array(exp[1], ndmin=dim))
- assert_allclose(special.factorial2(n, exact=exact),
- np.array(exp[2], ndmin=dim))
- assert_allclose(special.factorialk(n, 3, exact=exact),
- np.array(exp[3], ndmin=dim))
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("level", range(1, 5))
- def test_factorialx_array_like(self, level, exact):
- def _nest_me(x, k=1):
- if k == 0:
- return x
- else:
- return _nest_me([x], k-1)
- n = _nest_me([5], k=level-1) # nested list
- exp_nucleus = {1: 120, 2: 15, 3: 10}
- assert_func = assert_array_equal if exact else assert_allclose
- assert_func(special.factorial(n, exact=exact),
- np.array(exp_nucleus[1], ndmin=level))
- assert_func(special.factorial2(n, exact=exact),
- np.array(exp_nucleus[2], ndmin=level))
- assert_func(special.factorialk(n, 3, exact=exact),
- np.array(exp_nucleus[3], ndmin=level))
- @pytest.mark.fail_slow(5)
- @pytest.mark.parametrize("dtype", [np.uint8, np.uint16, np.uint32, np.uint64])
- @pytest.mark.parametrize("exact,extend",
- [(True, "zero"), (False, "zero"), (False, "complex")])
- def test_factorialx_uint(self, exact, extend, dtype):
- # ensure that uint types work correctly as inputs
- kw = {"exact": exact, "extend": extend}
- assert_func = assert_array_equal if exact else assert_allclose
- def _check(n):
- n_ref = n.astype(np.int64) if isinstance(n, np.ndarray) else np.int64(n)
- assert_func(special.factorial(n, **kw), special.factorial(n_ref, **kw))
- assert_func(special.factorial2(n, **kw), special.factorial2(n_ref, **kw))
- assert_func(special.factorialk(n, k=3, **kw),
- special.factorialk(n_ref, k=3, **kw))
- def _check_inf(n):
- # produce inf of same type/dimension
- with warnings.catch_warnings():
- warnings.simplefilter("ignore", RuntimeWarning)
- shaped_inf = n / 0
- assert_func(special.factorial(n, **kw), shaped_inf)
- assert_func(special.factorial2(n, **kw), shaped_inf)
- assert_func(special.factorialk(n, k=3, **kw), shaped_inf)
- _check(dtype(0))
- _check(dtype(1))
- _check(np.array(0, dtype=dtype))
- _check(np.array([0, 1], dtype=dtype))
- # test that maximal uint values work as well
- N = dtype(np.iinfo(dtype).max)
- # TODO: cannot use N itself yet; factorial uses `gamma(N+1)` resp. `(hi+lo)//2`
- if dtype == np.uint64:
- if exact:
- # avoid attempting huge calculation
- pass
- elif np.lib.NumpyVersion(np.__version__) >= "2.0.0":
- # N does not fit into int64 --> cannot use _check
- _check_inf(dtype(N-1))
- _check_inf(np.array(N-1, dtype=dtype))
- _check_inf(np.array([N-1], dtype=dtype))
- elif dtype in [np.uint8, np.uint16] or not exact:
- # factorial(65535, exact=True) has 287189 digits and is calculated almost
- # instantaneously on modern hardware; however, dtypes bigger than uint16
- # would blow up runtime and memory consumption for exact=True
- _check(N-1)
- _check(np.array(N-1, dtype=dtype))
- _check(np.array([N-2, N-1], dtype=dtype))
- # note that n=170 is the last integer such that factorial(n) fits float64
- @pytest.mark.parametrize('n', range(30, 180, 10))
- def test_factorial_accuracy(self, n):
- # Compare exact=True vs False, i.e. that the accuracy of the
- # approximation is better than the specified tolerance.
- rtol = 6e-14 if sys.platform == 'win32' else 1e-15
- # need to cast exact result to float due to numpy/numpy#21220
- assert_allclose(float(special.factorial(n, exact=True)),
- special.factorial(n, exact=False), rtol=rtol)
- assert_allclose(special.factorial([n], exact=True).astype(float),
- special.factorial([n], exact=False), rtol=rtol)
- @pytest.mark.parametrize('n',
- list(range(0, 22)) + list(range(30, 180, 10)))
- def test_factorial_int_reference(self, n):
- # Compare all with math.factorial
- correct = math.factorial(n)
- assert_array_equal(correct, special.factorial(n, exact=True))
- assert_array_equal(correct, special.factorial([n], exact=True)[0])
- rtol = 8e-14 if sys.platform == 'win32' else 1e-15
- # need to cast exact result to float due to numpy/numpy#21220
- correct = float(correct)
- assert_allclose(correct, special.factorial(n, exact=False), rtol=rtol)
- assert_allclose(correct, special.factorial([n], exact=False)[0], rtol=rtol)
- # extend="complex" only works for exact=False
- kw = {"exact": False, "extend": "complex"}
- assert_allclose(correct, special.factorial(n, **kw), rtol=rtol)
- assert_allclose(correct, special.factorial([n], **kw)[0], rtol=rtol)
- def test_factorial_float_reference(self):
- def _check(n, expected):
- rtol = 8e-14 if sys.platform == 'win32' else 1e-15
- assert_allclose(special.factorial(n), expected, rtol=rtol)
- assert_allclose(special.factorial([n])[0], expected, rtol=rtol)
- # using floats with `exact=True` raises an error for scalars and arrays
- with pytest.raises(ValueError, match="`exact=True` only supports.*"):
- special.factorial(n, exact=True)
- with pytest.raises(ValueError, match="`exact=True` only supports.*"):
- special.factorial([n], exact=True)
- # Reference values from mpmath for gamma(n+1)
- _check(0.01, 0.994325851191506032181932988)
- _check(1.11, 1.051609009483625091514147465)
- _check(5.55, 314.9503192327208241614959052)
- _check(11.1, 50983227.84411615655137170553)
- _check(33.3, 2.493363339642036352229215273e+37)
- _check(55.5, 9.479934358436729043289162027e+73)
- _check(77.7, 3.060540559059579022358692625e+114)
- _check(99.9, 5.885840419492871504575693337e+157)
- # close to maximum for float64
- _check(170.6243, 1.79698185749571048960082e+308)
- def test_factorial_complex_reference(self):
- def _check(n, expected):
- rtol = 3e-15 if sys.platform == 'win32' else 2e-15
- kw = {"exact": False, "extend": "complex"}
- assert_allclose(special.factorial(n, **kw), expected, rtol=rtol)
- assert_allclose(special.factorial([n], **kw)[0], expected, rtol=rtol)
- # Reference values from mpmath.gamma(n+1)
- # negative & complex values
- _check(-0.5, expected=1.7724538509055160276)
- _check(-0.5 + 0j, expected=1.7724538509055160276 + 0j)
- _check(2 + 2j, expected=-0.42263728631120216694 + 0.87181425569650686062j)
- # close to poles
- _check(-0.9999, expected=9999.422883232725532)
- _check(-1 + 0.0001j, expected=-0.57721565582674219 - 9999.9999010944009697j)
- @pytest.mark.parametrize("dtype", [np.int64, np.float64,
- np.complex128, object])
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("dim", range(0, 5))
- # test empty & non-empty arrays, with nans and mixed
- @pytest.mark.parametrize(
- "content",
- [[], [1], [1.1], [np.nan], [np.nan + np.nan * 1j], [np.nan, 1]],
- ids=["[]", "[1]", "[1.1]", "[NaN]", "[NaN+i*NaN]", "[NaN, 1]"],
- )
- def test_factorial_array_corner_cases(self, content, dim, exact, extend, dtype):
- if dtype is object and SCIPY_ARRAY_API:
- pytest.skip("object arrays unsupported in array API mode")
- # get dtype without calling array constructor (that might fail or mutate)
- if dtype is np.int64 and any(np.isnan(x) or (x != int(x)) for x in content):
- pytest.skip("impossible combination")
- if dtype == np.float64 and any(_is_subdtype(type(x), "c") for x in content):
- pytest.skip("impossible combination")
- kw = {"exact": exact, "extend": extend}
- # np.array(x, ndim=0) will not be 0-dim. unless x is too
- content = content if (dim > 0 or len(content) != 1) else content[0]
- n = np.array(content, ndmin=dim, dtype=dtype)
- result = None
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorial(n, **kw)
- elif not _is_subdtype(n.dtype, ["i", "f", "c"]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorial(n, **kw)
- elif _is_subdtype(n.dtype, "c") and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorial(n, **kw)
- elif exact and not _is_subdtype(n.dtype, "i"):
- with pytest.raises(ValueError, match="`exact=True` only supports.*"):
- special.factorial(n, **kw)
- else:
- result = special.factorial(n, **kw)
- if result is not None:
- # use scalar case as reference; tested separately in *_scalar_corner_cases
- ref = [special.factorial(x, **kw) for x in n.ravel()]
- # unpack length-1 lists so that np.array(x, ndim=0) works correctly
- ref = ref[0] if len(ref) == 1 else ref
- # result is empty if and only if n is empty, and has the same dimension
- # as n; dtype stays the same, except when not empty and not exact:
- if n.size:
- cx = (extend == "complex") and _is_subdtype(n.dtype, "c")
- dtype = np.complex128 if cx else (native_int if exact else np.float64)
- expected = np.array(ref, ndmin=dim, dtype=dtype)
- assert_really_equal(result, expected, rtol=1e-15)
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("n", [1, 1.1, 2 + 2j, np.nan, np.nan + np.nan*1j, None],
- ids=["1", "1.1", "2+2j", "NaN", "NaN+i*NaN", "None"])
- def test_factorial_scalar_corner_cases(self, n, exact, extend):
- kw = {"exact": exact, "extend": extend}
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorial(n, **kw)
- elif not _is_subdtype(type(n), ["i", "f", "c", type(None)]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorial(n, **kw)
- elif _is_subdtype(type(n), "c") and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorial(n, **kw)
- elif n is None or np.isnan(n):
- # account for dtype and whether extend="complex"
- complexify = (extend == "complex") and _is_subdtype(type(n), "c")
- expected = np.complex128("nan+nanj") if complexify else np.float64("nan")
- assert_really_equal(special.factorial(n, **kw), expected)
- elif exact and _is_subdtype(type(n), "f"):
- with pytest.raises(ValueError, match="`exact=True` only supports.*"):
- special.factorial(n, **kw)
- else:
- assert_equal(special.factorial(n, **kw), special.gamma(n + 1))
- # use odd increment to make sure both odd & even numbers are tested!
- @pytest.mark.parametrize('n', range(30, 180, 11))
- def test_factorial2_accuracy(self, n):
- # Compare exact=True vs False, i.e. that the accuracy of the
- # approximation is better than the specified tolerance.
- rtol = 2e-14 if sys.platform == 'win32' else 1e-15
- # need to cast exact result to float due to numpy/numpy#21220
- assert_allclose(float(special.factorial2(n, exact=True)),
- special.factorial2(n, exact=False), rtol=rtol)
- assert_allclose(special.factorial2([n], exact=True).astype(float),
- special.factorial2([n], exact=False), rtol=rtol)
- @pytest.mark.parametrize('n',
- list(range(0, 22)) + list(range(30, 180, 11)))
- def test_factorial2_int_reference(self, n):
- # Compare all with correct value
- # Cannot use np.product due to overflow
- correct = functools.reduce(operator.mul, list(range(n, 0, -2)), 1)
- assert_array_equal(correct, special.factorial2(n, exact=True))
- assert_array_equal(correct, special.factorial2([n], exact=True)[0])
- rtol = 2e-14 if sys.platform == 'win32' else 1e-15
- # need to cast exact result to float due to numpy/numpy#21220
- correct = float(correct)
- assert_allclose(correct, special.factorial2(n, exact=False), rtol=rtol)
- assert_allclose(correct, special.factorial2([n], exact=False)[0], rtol=rtol)
- # extend="complex" only works for exact=False
- kw = {"exact": False, "extend": "complex"}
- # approximation only matches exactly for `n == 1 (mod k)`, see docstring
- if n % 2 == 1:
- assert_allclose(correct, special.factorial2(n, **kw), rtol=rtol)
- assert_allclose(correct, special.factorial2([n], **kw)[0], rtol=rtol)
- def test_factorial2_complex_reference(self):
- # this tests for both floats and complex
- def _check(n, expected):
- rtol = 5e-15
- kw = {"exact": False, "extend": "complex"}
- assert_allclose(special.factorial2(n, **kw), expected, rtol=rtol)
- assert_allclose(special.factorial2([n], **kw)[0], expected, rtol=rtol)
- # Reference values from mpmath for:
- # mpmath.power(2, n/2) * mpmath.gamma(n/2 + 1) * mpmath.sqrt(2 / mpmath.pi)
- _check(3, expected=3)
- _check(4, expected=special.factorial2(4) * math.sqrt(2 / math.pi))
- _check(20, expected=special.factorial2(20) * math.sqrt(2 / math.pi))
- # negative & complex values
- _check(-0.5, expected=0.82217895866245855122)
- _check(-0.5 + 0j, expected=0.82217895866245855122 + 0j)
- _check(3 + 3j, expected=-1.0742236630142471526 + 1.4421398439387262897j)
- # close to poles
- _check(-1.9999, expected=7978.8918745523440682)
- _check(-2 + 0.0001j, expected=0.0462499835314308444 - 7978.84559148876374493j)
- @pytest.mark.parametrize("dtype", [np.int64, np.float64,
- np.complex128, object])
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("dim", range(0, 5))
- # test empty & non-empty arrays, with nans and mixed
- @pytest.mark.parametrize(
- "content",
- [[], [1], [1.1], [np.nan], [np.nan + np.nan * 1j], [np.nan, 1]],
- ids=["[]", "[1]", "[1.1]", "[NaN]", "[NaN+i*NaN]", "[NaN, 1]"],
- )
- def test_factorial2_array_corner_cases(self, content, dim, exact, extend, dtype):
- # get dtype without calling array constructor (that might fail or mutate)
- if dtype == np.int64 and any(np.isnan(x) or (x != int(x)) for x in content):
- pytest.skip("impossible combination")
- if dtype == np.float64 and any(_is_subdtype(type(x), "c") for x in content):
- pytest.skip("impossible combination")
- kw = {"exact": exact, "extend": extend}
- # np.array(x, ndim=0) will not be 0-dim. unless x is too
- content = content if (dim > 0 or len(content) != 1) else content[0]
- n = np.array(content, ndmin=dim, dtype=dtype)
- result = None
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorial2(n, **kw)
- elif not _is_subdtype(n.dtype, ["i", "f", "c"]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorial2(n, **kw)
- elif _is_subdtype(n.dtype, ["f", "c"]) and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorial2(n, **kw)
- else:
- result = special.factorial2(n, **kw)
- if result is not None:
- # use scalar case as reference; tested separately in *_scalar_corner_cases
- ref = [special.factorial2(x, **kw) for x in n.ravel()]
- # unpack length-1 lists so that np.array(x, ndim=0) works correctly
- ref = ref[0] if len(ref) == 1 else ref
- # result is empty if and only if n is empty, and has the same dimension
- # as n; dtype stays the same, except when not empty and not exact:
- if n.size:
- cx = (extend == "complex") and _is_subdtype(n.dtype, "c")
- dtype = np.complex128 if cx else (native_int if exact else np.float64)
- expected = np.array(ref, ndmin=dim, dtype=dtype)
- assert_really_equal(result, expected, rtol=2e-15)
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("n", [1, 1.1, 2 + 2j, np.nan, np.nan + np.nan*1j, None],
- ids=["1", "1.1", "2+2j", "NaN", "NaN+i*NaN", "None"])
- def test_factorial2_scalar_corner_cases(self, n, exact, extend):
- kw = {"exact": exact, "extend": extend}
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorial2(n, **kw)
- elif not _is_subdtype(type(n), ["i", "f", "c", type(None)]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorial2(n, **kw)
- elif _is_subdtype(type(n), ["f", "c"]) and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorial2(n, **kw)
- elif n is None or np.isnan(n):
- # account for dtype and whether extend="complex"
- complexify = (extend == "complex") and _is_subdtype(type(n), "c")
- expected = np.complex128("nan+nanj") if complexify else np.float64("nan")
- assert_really_equal(special.factorial2(n, **kw), expected)
- else:
- expected = self.factorialk_ref(n, k=2, **kw)
- assert_really_equal(special.factorial2(n, **kw), expected, rtol=1e-15)
- @pytest.mark.parametrize("k", range(1, 5))
- # note that n=170 is the last integer such that factorial(n) fits float64;
- # use odd increment to make sure both odd & even numbers are tested
- @pytest.mark.parametrize('n', range(170, 20, -29))
- def test_factorialk_accuracy(self, n, k):
- # Compare exact=True vs False, i.e. that the accuracy of the
- # approximation is better than the specified tolerance.
- rtol = 6e-14 if sys.platform == 'win32' else 2e-14
- # need to cast exact result to float due to numpy/numpy#21220
- assert_allclose(float(special.factorialk(n, k=k, exact=True)),
- special.factorialk(n, k=k, exact=False), rtol=rtol)
- assert_allclose(special.factorialk([n], k=k, exact=True).astype(float),
- special.factorialk([n], k=k, exact=False), rtol=rtol)
- @pytest.mark.parametrize('k', list(range(1, 5)) + [10, 20])
- @pytest.mark.parametrize('n',
- list(range(0, 22)) + list(range(22, 100, 11)))
- def test_factorialk_int_reference(self, n, k):
- # Compare all with correct value
- # Would be nice to use np.product here, but that's
- # broken on windows, see numpy/numpy#21219
- correct = functools.reduce(operator.mul, list(range(n, 0, -k)), 1)
- assert_array_equal(correct, special.factorialk(n, k, exact=True))
- assert_array_equal(correct, special.factorialk([n], k, exact=True)[0])
- rtol = 3e-14 if sys.platform == 'win32' else 1e-14
- # need to cast exact result to float due to numpy/numpy#21220
- correct = float(correct)
- assert_allclose(correct, special.factorialk(n, k, exact=False), rtol=rtol)
- assert_allclose(correct, special.factorialk([n], k, exact=False)[0], rtol=rtol)
- # extend="complex" only works for exact=False
- kw = {"k": k, "exact": False, "extend": "complex"}
- # approximation only matches exactly for `n == 1 (mod k)`, see docstring
- if n % k == 1:
- rtol = 2e-14
- assert_allclose(correct, special.factorialk(n, **kw), rtol=rtol)
- assert_allclose(correct, special.factorialk([n], **kw)[0], rtol=rtol)
- def test_factorialk_complex_reference(self):
- # this tests for both floats and complex
- def _check(n, k, exp):
- rtol = 1e-14
- kw = {"k": k, "exact": False, "extend": "complex"}
- assert_allclose(special.factorialk(n, **kw), exp, rtol=rtol)
- assert_allclose(special.factorialk([n], **kw)[0], exp, rtol=rtol)
- # Reference values from mpmath for:
- # mpmath.power(k, (n-1)/k) * mpmath.gamma(n/k + 1) / mpmath.gamma(1/k + 1)
- _check(n=4, k=3, exp=special.factorialk(4, k=3, exact=True))
- _check(n=5, k=3, exp=7.29011132947227083)
- _check(n=6.5, k=3, exp=19.6805080113566010)
- # non-integer k
- _check(n=3, k=2.5, exp=2.58465740293218541)
- _check(n=11, k=2.5, exp=1963.5) # ==11*8.5*6*3.5; c.f. n == 1 (mod k)
- _check(n=-3 + 3j + 1, k=-3 + 3j, exp=-2 + 3j)
- # complex values
- _check(n=4 + 4j, k=4, exp=-0.67855904082768043854 + 2.1993925819930311497j)
- _check(n=4, k=4 - 4j, exp=1.9775338957222718742 + 0.92607172675423901371j)
- _check(n=4 + 4j, k=4 - 4j, exp=0.1868492880824934475 + 0.87660580316894290247j)
- # negative values
- _check(n=-0.5, k=3, exp=0.72981013240713739354)
- _check(n=-0.5 + 0j, k=3, exp=0.72981013240713739354 + 0j)
- _check(n=2.9, k=-0.7, exp=0.45396591474966867296 + 0.56925525174685228866j)
- _check(n=-0.6, k=-0.7, exp=-0.07190820089634757334 - 0.090170031876701730081j)
- # close to poles
- _check(n=-2.9999, k=3, exp=7764.7170695908828364)
- _check(n=-3 + 0.0001j, k=3, exp=0.1349475632879599864 - 7764.5821055158365027j)
- @pytest.mark.parametrize("dtype", [np.int64, np.float64,
- np.complex128, object])
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("dim", range(0, 5))
- # test empty & non-empty arrays, with nans and mixed
- @pytest.mark.parametrize(
- "content",
- [[], [1], [1.1], [np.nan], [np.nan + np.nan * 1j], [np.nan, 1]],
- ids=["[]", "[1]", "[1.1]", "[NaN]", "[NaN+i*NaN]", "[NaN, 1]"],
- )
- def test_factorialk_array_corner_cases(self, content, dim, exact, extend, dtype):
- # get dtype without calling array constructor (that might fail or mutate)
- if dtype == np.int64 and any(np.isnan(x) or (x != int(x)) for x in content):
- pytest.skip("impossible combination")
- if dtype == np.float64 and any(_is_subdtype(type(x), "c") for x in content):
- pytest.skip("impossible combination")
- kw = {"k": 3, "exact": exact, "extend": extend}
- # np.array(x, ndim=0) will not be 0-dim. unless x is too
- content = content if (dim > 0 or len(content) != 1) else content[0]
- n = np.array(content, ndmin=dim, dtype=dtype)
- result = None
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorialk(n, **kw)
- elif not _is_subdtype(n.dtype, ["i", "f", "c"]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorialk(n, **kw)
- elif _is_subdtype(n.dtype, ["f", "c"]) and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorialk(n, **kw)
- else:
- result = special.factorialk(n, **kw)
- if result is not None:
- # use scalar case as reference; tested separately in *_scalar_corner_cases
- ref = [special.factorialk(x, **kw) for x in n.ravel()]
- # unpack length-1 lists so that np.array(x, ndim=0) works correctly
- ref = ref[0] if len(ref) == 1 else ref
- # result is empty if and only if n is empty, and has the same dimension
- # as n; dtype stays the same, except when not empty and not exact:
- if n.size:
- cx = (extend == "complex") and _is_subdtype(n.dtype, "c")
- dtype = np.complex128 if cx else (native_int if exact else np.float64)
- expected = np.array(ref, ndmin=dim, dtype=dtype)
- assert_really_equal(result, expected, rtol=2e-15)
- @pytest.mark.parametrize("extend", ["zero", "complex"])
- @pytest.mark.parametrize("exact", [True, False])
- @pytest.mark.parametrize("k", range(1, 5))
- @pytest.mark.parametrize("n", [1, 1.1, 2 + 2j, np.nan, np.nan + np.nan*1j, None],
- ids=["1", "1.1", "2+2j", "NaN", "NaN+i*NaN", "None"])
- def test_factorialk_scalar_corner_cases(self, n, k, exact, extend):
- kw = {"k": k, "exact": exact, "extend": extend}
- if extend == "complex" and exact:
- with pytest.raises(ValueError, match="Incompatible options:.*"):
- special.factorialk(n, **kw)
- elif not _is_subdtype(type(n), ["i", "f", "c", type(None)]):
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorialk(n, **kw)
- elif _is_subdtype(type(n), ["f", "c"]) and extend != "complex":
- with pytest.raises(ValueError, match="In order to use non-integer.*"):
- special.factorialk(n, **kw)
- elif n is None or np.isnan(n):
- # account for dtype and whether extend="complex"
- complexify = (extend == "complex") and _is_subdtype(type(n), "c")
- expected = np.complex128("nan+nanj") if complexify else np.float64("nan")
- assert_really_equal(special.factorialk(n, **kw), expected)
- else:
- expected = self.factorialk_ref(n, **kw)
- assert_really_equal(special.factorialk(n, **kw), expected, rtol=1e-15)
- @pytest.mark.parametrize("boxed", [True, False])
- @pytest.mark.parametrize("exact,extend",
- [(True, "zero"), (False, "zero"), (False, "complex")])
- @pytest.mark.parametrize("k", [-1, -1.0, 0, 0.0, 0 + 1j, 1.1, np.nan])
- def test_factorialk_raises_k_complex(self, k, exact, extend, boxed):
- n = [1] if boxed else 1
- kw = {"k": k, "exact": exact, "extend": extend}
- if extend == "zero":
- msg = "In order to use non-integer.*"
- if _is_subdtype(type(k), "i") and (k < 1):
- msg = "For `extend='zero'`.*"
- with pytest.raises(ValueError, match=msg):
- special.factorialk(n, **kw)
- elif k == 0:
- with pytest.raises(ValueError, match="Parameter k cannot be zero!"):
- special.factorialk(n, **kw)
- else:
- # no error
- special.factorialk(n, **kw)
- @pytest.mark.parametrize("boxed", [True, False])
- @pytest.mark.parametrize("exact,extend",
- [(True, "zero"), (False, "zero"), (False, "complex")])
- # neither integer, float nor complex
- @pytest.mark.parametrize("k", ["string", np.datetime64("nat")],
- ids=["string", "NaT"])
- def test_factorialk_raises_k_other(self, k, exact, extend, boxed):
- n = [1] if boxed else 1
- kw = {"k": k, "exact": exact, "extend": extend}
- with pytest.raises(ValueError, match="Unsupported data type.*"):
- special.factorialk(n, **kw)
- @pytest.mark.parametrize("exact,extend",
- [(True, "zero"), (False, "zero"), (False, "complex")])
- @pytest.mark.parametrize("k", range(1, 12))
- def test_factorialk_dtype(self, k, exact, extend):
- kw = {"k": k, "exact": exact, "extend": extend}
- if exact and k in _FACTORIALK_LIMITS_64BITS.keys():
- n = np.array([_FACTORIALK_LIMITS_32BITS[k]])
- assert_equal(special.factorialk(n, **kw).dtype, np_long)
- assert_equal(special.factorialk(n + 1, **kw).dtype, np.int64)
- # assert maximality of limits for given dtype
- assert special.factorialk(n + 1, **kw) > np.iinfo(np.int32).max
- n = np.array([_FACTORIALK_LIMITS_64BITS[k]])
- assert_equal(special.factorialk(n, **kw).dtype, np.int64)
- assert_equal(special.factorialk(n + 1, **kw).dtype, object)
- assert special.factorialk(n + 1, **kw) > np.iinfo(np.int64).max
- else:
- n = np.array([_FACTORIALK_LIMITS_64BITS.get(k, 1)])
- # for exact=True and k >= 10, we always return object;
- # for exact=False it's always float (unless input is complex)
- dtype = object if exact else np.float64
- assert_equal(special.factorialk(n, **kw).dtype, dtype)
- def test_factorial_mixed_nan_inputs(self):
- x = np.array([np.nan, 1, 2, 3, np.nan])
- expected = np.array([np.nan, 1, 2, 6, np.nan])
- assert_equal(special.factorial(x, exact=False), expected)
- with pytest.raises(ValueError, match="`exact=True` only supports.*"):
- special.factorial(x, exact=True)
- class TestFresnel:
- @pytest.mark.parametrize("z, s, c", [
- # some positive value
- (.5, 0.064732432859999287, 0.49234422587144644),
- (.5 + .0j, 0.064732432859999287, 0.49234422587144644),
- # negative half annulus
- # https://github.com/scipy/scipy/issues/12309
- # Reference values can be reproduced with
- # https://www.wolframalpha.com/input/?i=FresnelS%5B-2.0+%2B+0.1i%5D
- # https://www.wolframalpha.com/input/?i=FresnelC%5B-2.0+%2B+0.1i%5D
- (
- -2.0 + 0.1j,
- -0.3109538687728942-0.0005870728836383176j,
- -0.4879956866358554+0.10670801832903172j
- ),
- (
- -0.1 - 1.5j,
- -0.03918309471866977+0.7197508454568574j,
- 0.09605692502968956-0.43625191013617465j
- ),
- # a different algorithm kicks in for "large" values, i.e., |z| >= 4.5,
- # make sure to test both float and complex values; a different
- # algorithm is used
- (6.0, 0.44696076, 0.49953147),
- (6.0 + 0.0j, 0.44696076, 0.49953147),
- (6.0j, -0.44696076j, 0.49953147j),
- (-6.0 + 0.0j, -0.44696076, -0.49953147),
- (-6.0j, 0.44696076j, -0.49953147j),
- # inf
- (np.inf, 0.5, 0.5),
- (-np.inf, -0.5, -0.5),
- ])
- def test_fresnel_values(self, z, s, c):
- frs = array(special.fresnel(z))
- assert_allclose(frs, array([s, c]), atol=1.5e-8, rtol=0)
- # values from pg 329 Table 7.11 of A & S
- # slightly corrected in 4th decimal place
- def test_fresnel_zeros(self):
- szo, czo = special.fresnel_zeros(5)
- assert_allclose(szo, array([2.0093+0.2885j,
- 2.8335+0.2443j,
- 3.4675+0.2185j,
- 4.0026+0.2009j,
- 4.4742+0.1877j]),
- atol=1.5e-3, rtol=0)
- assert_allclose(czo, array([1.7437+0.3057j,
- 2.6515+0.2529j,
- 3.3204+0.2240j,
- 3.8757+0.2047j,
- 4.3611+0.1907j]),
- atol=1.5e-3, rtol=0)
- vals1 = special.fresnel(szo)[0]
- vals2 = special.fresnel(czo)[1]
- assert_allclose(vals1, 0, atol=1.5e-14, rtol=0)
- assert_allclose(vals2, 0, atol=1.5e-14, rtol=0)
- def test_fresnelc_zeros(self):
- szo, czo = special.fresnel_zeros(6)
- frc = special.fresnelc_zeros(6)
- assert_allclose(frc, czo, atol=1.5e-12, rtol=0)
- def test_fresnels_zeros(self):
- szo, czo = special.fresnel_zeros(5)
- frs = special.fresnels_zeros(5)
- assert_allclose(frs, szo, atol=1.5e-12, rtol=0)
- class TestGamma:
- def test_gamma(self):
- gam = special.gamma(5)
- assert_equal(gam,24.0)
- def test_gammaln(self):
- gamln = special.gammaln(3)
- lngam = log(special.gamma(3))
- assert_allclose(gamln, lngam, atol=1.5e-8, rtol=0)
- def test_gammainccinv(self):
- gccinv = special.gammainccinv(.5,.5)
- gcinv = special.gammaincinv(.5,.5)
- assert_allclose(gccinv, gcinv, atol=1.5e-8, rtol=0)
- @with_special_errors
- def test_gammaincinv(self):
- y = special.gammaincinv(.4,.4)
- x = special.gammainc(.4,y)
- assert_allclose(x, 0.4, atol=1.5e-10, rtol=0)
- y = special.gammainc(10, 0.05)
- x = special.gammaincinv(10, 2.5715803516000736e-20)
- assert_allclose(0.05, x, atol=1.5e-10, rtol=0)
- assert_allclose(y, 2.5715803516000736e-20, atol=1.5e-10, rtol=0)
- x = special.gammaincinv(50, 8.20754777388471303050299243573393e-18)
- assert_allclose(11.0, x, atol=1.5e-10, rtol=0)
- @with_special_errors
- def test_975(self):
- # Regression test for ticket #975 -- switch point in algorithm
- # check that things work OK at the point, immediately next floats
- # around it, and a bit further away
- pts = [0.25,
- np.nextafter(0.25, 0), 0.25 - 1e-12,
- np.nextafter(0.25, 1), 0.25 + 1e-12]
- for pt in pts:
- y = special.gammaincinv(.4, pt)
- x = special.gammainc(0.4, y)
- assert_allclose(x, pt, rtol=1e-12)
- def test_rgamma(self):
- rgam = special.rgamma(8)
- rlgam = 1/special.gamma(8)
- assert_allclose(rgam, rlgam, atol=1.5e-8, rtol=0)
- def test_infinity(self):
- assert_equal(special.rgamma(-1), 0)
- @pytest.mark.parametrize(
- "x,expected",
- [
- # infinities
- ([-np.inf, np.inf], [np.nan, np.inf]),
- # negative and positive zero
- ([-0.0, 0.0], [-np.inf, np.inf]),
- # small poles
- (range(-32, 0), np.full(32, np.nan)),
- # medium sized poles
- (range(-1024, -32, 99), np.full(11, np.nan)),
- # large pole
- ([-4.141512231792294e+16], [np.nan]),
- ]
- )
- def test_poles(self, x, expected):
- assert_array_equal(special.gamma(x), expected)
- class TestHankel:
- def test_negv1(self):
- assert_allclose(special.hankel1(-3, 2), -special.hankel1(3, 2),
- atol=1.5e-14, rtol=0)
- def test_hankel1(self):
- hank1 = special.hankel1(1,.1)
- hankrl = (special.jv(1,.1) + special.yv(1,.1)*1j)
- assert_allclose(hank1, hankrl, atol=1.5e-8, rtol=0)
- def test_negv1e(self):
- assert_allclose(special.hankel1e(-3, 2), -special.hankel1e(3, 2),
- atol=1.5e-14, rtol=0)
- def test_hankel1e(self):
- hank1e = special.hankel1e(1,.1)
- hankrle = special.hankel1(1,.1)*exp(-.1j)
- assert_allclose(hank1e, hankrle, atol=1.5e-8, rtol=0)
- def test_negv2(self):
- assert_allclose(special.hankel2(-3, 2), -special.hankel2(3, 2),
- atol=1.5e-14, rtol=0)
- def test_hankel2(self):
- hank2 = special.hankel2(1,.1)
- hankrl2 = (special.jv(1,.1) - special.yv(1,.1)*1j)
- assert_allclose(hank2, hankrl2, atol=1.5e-8, rtol=0)
- def test_neg2e(self):
- assert_allclose(special.hankel2e(-3, 2), -special.hankel2e(3, 2),
- atol=1.5e-14, rtol=0)
- def test_hankl2e(self):
- hank2e = special.hankel2e(1,.1)
- hankrl2e = special.hankel2e(1,.1)
- assert_allclose(hank2e, hankrl2e, atol=1.5e-8, rtol=0)
- def test_hankel2_gh4517(self):
- # Test edge case reported in https://github.com/scipy/scipy/issues/4517
- res = special.hankel2(0, 0)
- assert np.isnan(res.real)
- assert np.isposinf(res.imag)
- class TestHyper:
- def test_h1vp(self):
- h1 = special.h1vp(1,.1)
- h1real = (special.jvp(1,.1) + special.yvp(1,.1)*1j)
- assert_allclose(h1, h1real, atol=1.5e-8, rtol=0)
- def test_h2vp(self):
- h2 = special.h2vp(1,.1)
- h2real = (special.jvp(1,.1) - special.yvp(1,.1)*1j)
- assert_allclose(h2, h2real, atol=1.5e-8, rtol=0)
- def test_hyp0f1(self):
- # scalar input
- assert_allclose(special.hyp0f1(2.5, 0.5), 1.21482702689997, rtol=1e-12)
- assert_allclose(special.hyp0f1(2.5, 0), 1.0, rtol=1e-15)
- # float input, expected values match mpmath
- x = special.hyp0f1(3.0, [-1.5, -1, 0, 1, 1.5])
- expected = np.array([0.58493659229143, 0.70566805723127, 1.0,
- 1.37789689539747, 1.60373685288480])
- assert_allclose(x, expected, rtol=1e-12)
- # complex input
- x = special.hyp0f1(3.0, np.array([-1.5, -1, 0, 1, 1.5]) + 0.j)
- assert_allclose(x, expected.astype(complex), rtol=1e-12)
- # test broadcasting
- x1 = [0.5, 1.5, 2.5]
- x2 = [0, 1, 0.5]
- x = special.hyp0f1(x1, x2)
- expected = [1.0, 1.8134302039235093, 1.21482702689997]
- assert_allclose(x, expected, rtol=1e-12)
- x = special.hyp0f1(np.vstack([x1] * 2), x2)
- assert_allclose(x, np.vstack([expected] * 2), rtol=1e-12)
- assert_raises(ValueError, special.hyp0f1,
- np.vstack([x1] * 3), [0, 1])
- def test_hyp0f1_gh5764(self):
- # Just checks the point that failed; there's a more systematic
- # test in test_mpmath
- res = special.hyp0f1(0.8, 0.5 + 0.5*1J)
- # The expected value was generated using mpmath
- assert_allclose(res, 1.6139719776441115 + 1J*0.80893054061790665,
- atol=1.5e-7, rtol=0)
- def test_hyp1f1(self):
- hyp1 = special.hyp1f1(.1,.1,.3)
- assert_allclose(hyp1, 1.3498588075760032, atol=1.5e-7, rtol=0)
- # test contributed by Moritz Deger (2008-05-29)
- # https://github.com/scipy/scipy/issues/1186 (Trac #659)
- # reference data obtained from mathematica [ a, b, x, m(a,b,x)]:
- # produced with test_hyp1f1.nb
- ref_data = array([
- [-8.38132975e+00, -1.28436461e+01, -2.91081397e+01, 1.04178330e+04],
- [2.91076882e+00, -6.35234333e+00, -1.27083993e+01, 6.68132725e+00],
- [-1.42938258e+01, 1.80869131e-01, 1.90038728e+01, 1.01385897e+05],
- [5.84069088e+00, 1.33187908e+01, 2.91290106e+01, 1.59469411e+08],
- [-2.70433202e+01, -1.16274873e+01, -2.89582384e+01, 1.39900152e+24],
- [4.26344966e+00, -2.32701773e+01, 1.91635759e+01, 6.13816915e+21],
- [1.20514340e+01, -3.40260240e+00, 7.26832235e+00, 1.17696112e+13],
- [2.77372955e+01, -1.99424687e+00, 3.61332246e+00, 3.07419615e+13],
- [1.50310939e+01, -2.91198675e+01, -1.53581080e+01, -3.79166033e+02],
- [1.43995827e+01, 9.84311196e+00, 1.93204553e+01, 2.55836264e+10],
- [-4.08759686e+00, 1.34437025e+01, -1.42072843e+01, 1.70778449e+01],
- [8.05595738e+00, -1.31019838e+01, 1.52180721e+01, 3.06233294e+21],
- [1.81815804e+01, -1.42908793e+01, 9.57868793e+00, -2.84771348e+20],
- [-2.49671396e+01, 1.25082843e+01, -1.71562286e+01, 2.36290426e+07],
- [2.67277673e+01, 1.70315414e+01, 6.12701450e+00, 7.77917232e+03],
- [2.49565476e+01, 2.91694684e+01, 6.29622660e+00, 2.35300027e+02],
- [6.11924542e+00, -1.59943768e+00, 9.57009289e+00, 1.32906326e+11],
- [-1.47863653e+01, 2.41691301e+01, -1.89981821e+01, 2.73064953e+03],
- [2.24070483e+01, -2.93647433e+00, 8.19281432e+00, -6.42000372e+17],
- [8.04042600e-01, 1.82710085e+01, -1.97814534e+01, 5.48372441e-01],
- [1.39590390e+01, 1.97318686e+01, 2.37606635e+00, 5.51923681e+00],
- [-4.66640483e+00, -2.00237930e+01, 7.40365095e+00, 4.50310752e+00],
- [2.76821999e+01, -6.36563968e+00, 1.11533984e+01, -9.28725179e+23],
- [-2.56764457e+01, 1.24544906e+00, 1.06407572e+01, 1.25922076e+01],
- [3.20447808e+00, 1.30874383e+01, 2.26098014e+01, 2.03202059e+04],
- [-1.24809647e+01, 4.15137113e+00, -2.92265700e+01, 2.39621411e+08],
- [2.14778108e+01, -2.35162960e+00, -1.13758664e+01, 4.46882152e-01],
- [-9.85469168e+00, -3.28157680e+00, 1.67447548e+01, -1.07342390e+07],
- [1.08122310e+01, -2.47353236e+01, -1.15622349e+01, -2.91733796e+03],
- [-2.67933347e+01, -3.39100709e+00, 2.56006986e+01, -5.29275382e+09],
- [-8.60066776e+00, -8.02200924e+00, 1.07231926e+01, 1.33548320e+06],
- [-1.01724238e-01, -1.18479709e+01, -2.55407104e+01, 1.55436570e+00],
- [-3.93356771e+00, 2.11106818e+01, -2.57598485e+01, 2.13467840e+01],
- [3.74750503e+00, 1.55687633e+01, -2.92841720e+01, 1.43873509e-02],
- [6.99726781e+00, 2.69855571e+01, -1.63707771e+01, 3.08098673e-02],
- [-2.31996011e+01, 3.47631054e+00, 9.75119815e-01, 1.79971073e-02],
- [2.38951044e+01, -2.91460190e+01, -2.50774708e+00, 9.56934814e+00],
- [1.52730825e+01, 5.77062507e+00, 1.21922003e+01, 1.32345307e+09],
- [1.74673917e+01, 1.89723426e+01, 4.94903250e+00, 9.90859484e+01],
- [1.88971241e+01, 2.86255413e+01, 5.52360109e-01, 1.44165360e+00],
- [1.02002319e+01, -1.66855152e+01, -2.55426235e+01, 6.56481554e+02],
- [-1.79474153e+01, 1.22210200e+01, -1.84058212e+01, 8.24041812e+05],
- [-1.36147103e+01, 1.32365492e+00, -7.22375200e+00, 9.92446491e+05],
- [7.57407832e+00, 2.59738234e+01, -1.34139168e+01, 3.64037761e-02],
- [2.21110169e+00, 1.28012666e+01, 1.62529102e+01, 1.33433085e+02],
- [-2.64297569e+01, -1.63176658e+01, -1.11642006e+01, -2.44797251e+13],
- [-2.46622944e+01, -3.02147372e+00, 8.29159315e+00, -3.21799070e+05],
- [-1.37215095e+01, -1.96680183e+01, 2.91940118e+01, 3.21457520e+12],
- [-5.45566105e+00, 2.81292086e+01, 1.72548215e-01, 9.66973000e-01],
- [-1.55751298e+00, -8.65703373e+00, 2.68622026e+01, -3.17190834e+16],
- [2.45393609e+01, -2.70571903e+01, 1.96815505e+01, 1.80708004e+37],
- [5.77482829e+00, 1.53203143e+01, 2.50534322e+01, 1.14304242e+06],
- [-1.02626819e+01, 2.36887658e+01, -2.32152102e+01, 7.28965646e+02],
- [-1.30833446e+00, -1.28310210e+01, 1.87275544e+01, -9.33487904e+12],
- [5.83024676e+00, -1.49279672e+01, 2.44957538e+01, -7.61083070e+27],
- [-2.03130747e+01, 2.59641715e+01, -2.06174328e+01, 4.54744859e+04],
- [1.97684551e+01, -2.21410519e+01, -2.26728740e+01, 3.53113026e+06],
- [2.73673444e+01, 2.64491725e+01, 1.57599882e+01, 1.07385118e+07],
- [5.73287971e+00, 1.21111904e+01, 1.33080171e+01, 2.63220467e+03],
- [-2.82751072e+01, 2.08605881e+01, 9.09838900e+00, -6.60957033e-07],
- [1.87270691e+01, -1.74437016e+01, 1.52413599e+01, 6.59572851e+27],
- [6.60681457e+00, -2.69449855e+00, 9.78972047e+00, -2.38587870e+12],
- [1.20895561e+01, -2.51355765e+01, 2.30096101e+01, 7.58739886e+32],
- [-2.44682278e+01, 2.10673441e+01, -1.36705538e+01, 4.54213550e+04],
- [-4.50665152e+00, 3.72292059e+00, -4.83403707e+00, 2.68938214e+01],
- [-7.46540049e+00, -1.08422222e+01, -1.72203805e+01, -2.09402162e+02],
- [-2.00307551e+01, -7.50604431e+00, -2.78640020e+01, 4.15985444e+19],
- [1.99890876e+01, 2.20677419e+01, -2.51301778e+01, 1.23840297e-09],
- [2.03183823e+01, -7.66942559e+00, 2.10340070e+01, 1.46285095e+31],
- [-2.90315825e+00, -2.55785967e+01, -9.58779316e+00, 2.65714264e-01],
- [2.73960829e+01, -1.80097203e+01, -2.03070131e+00, 2.52908999e+02],
- [-2.11708058e+01, -2.70304032e+01, 2.48257944e+01, 3.09027527e+08],
- [2.21959758e+01, 4.00258675e+00, -1.62853977e+01, -9.16280090e-09],
- [1.61661840e+01, -2.26845150e+01, 2.17226940e+01, -8.24774394e+33],
- [-3.35030306e+00, 1.32670581e+00, 9.39711214e+00, -1.47303163e+01],
- [7.23720726e+00, -2.29763909e+01, 2.34709682e+01, -9.20711735e+29],
- [2.71013568e+01, 1.61951087e+01, -7.11388906e-01, 2.98750911e-01],
- [8.40057933e+00, -7.49665220e+00, 2.95587388e+01, 6.59465635e+29],
- [-1.51603423e+01, 1.94032322e+01, -7.60044357e+00, 1.05186941e+02],
- [-8.83788031e+00, -2.72018313e+01, 1.88269907e+00, 1.81687019e+00],
- [-1.87283712e+01, 5.87479570e+00, -1.91210203e+01, 2.52235612e+08],
- [-5.61338513e-01, 2.69490237e+01, 1.16660111e-01, 9.97567783e-01],
- [-5.44354025e+00, -1.26721408e+01, -4.66831036e+00, 1.06660735e-01],
- [-2.18846497e+00, 2.33299566e+01, 9.62564397e+00, 3.03842061e-01],
- [6.65661299e+00, -2.39048713e+01, 1.04191807e+01, 4.73700451e+13],
- [-2.57298921e+01, -2.60811296e+01, 2.74398110e+01, -5.32566307e+11],
- [-1.11431826e+01, -1.59420160e+01, -1.84880553e+01, -1.01514747e+02],
- [6.50301931e+00, 2.59859051e+01, -2.33270137e+01, 1.22760500e-02],
- [-1.94987891e+01, -2.62123262e+01, 3.90323225e+00, 1.71658894e+01],
- [7.26164601e+00, -1.41469402e+01, 2.81499763e+01, -2.50068329e+31],
- [-1.52424040e+01, 2.99719005e+01, -2.85753678e+01, 1.31906693e+04],
- [5.24149291e+00, -1.72807223e+01, 2.22129493e+01, 2.50748475e+25],
- [3.63207230e-01, -9.54120862e-02, -2.83874044e+01, 9.43854939e-01],
- [-2.11326457e+00, -1.25707023e+01, 1.17172130e+00, 1.20812698e+00],
- [2.48513582e+00, 1.03652647e+01, -1.84625148e+01, 6.47910997e-02],
- [2.65395942e+01, 2.74794672e+01, 1.29413428e+01, 2.89306132e+05],
- [-9.49445460e+00, 1.59930921e+01, -1.49596331e+01, 3.27574841e+02],
- [-5.89173945e+00, 9.96742426e+00, 2.60318889e+01, -3.15842908e-01],
- [-1.15387239e+01, -2.21433107e+01, -2.17686413e+01, 1.56724718e-01],
- [-5.30592244e+00, -2.42752190e+01, 1.29734035e+00, 1.31985534e+00]
- ])
- for a,b,c,expected in ref_data:
- result = special.hyp1f1(a,b,c)
- assert_(abs(expected - result)/expected < 1e-4)
- def test_hyp1f1_gh2957(self):
- hyp1 = special.hyp1f1(0.5, 1.5, -709.7827128933)
- hyp2 = special.hyp1f1(0.5, 1.5, -709.7827128934)
- assert_allclose(hyp1, hyp2, atol=1.5e-12, rtol=0)
- def test_hyp1f1_gh2282(self):
- hyp = special.hyp1f1(0.5, 1.5, -1000)
- assert_allclose(hyp, 0.028024956081989643, atol=1.5e-12, rtol=0)
- def test_hyp2f1(self):
- # a collection of special cases taken from AMS 55
- values = [
- [0.5, 1, 1.5, 0.2**2, 0.5/0.2*log((1+0.2)/(1-0.2))],
- [0.5, 1, 1.5, -0.2**2, 1./0.2*arctan(0.2)],
- [1, 1, 2, 0.2, -1/0.2*log(1-0.2)],
- [3, 3.5, 1.5, 0.2**2, 0.5/0.2/(-5)*((1+0.2)**(-5)-(1-0.2)**(-5))],
- [-3, 3, 0.5, sin(0.2)**2, cos(2*3*0.2)],
- [3, 4, 8, 1,
- special.gamma(8) * special.gamma(8-4-3)
- / special.gamma(8-3) / special.gamma(8-4)],
- [3, 2, 3-2+1, -1,
- 1./2**3*sqrt(pi) * special.gamma(1+3-2)
- / special.gamma(1+0.5*3-2) / special.gamma(0.5+0.5*3)],
- [5, 2, 5-2+1, -1,
- 1./2**5*sqrt(pi) * special.gamma(1+5-2)
- / special.gamma(1+0.5*5-2) / special.gamma(0.5+0.5*5)],
- [4, 0.5+4, 1.5-2*4, -1./3,
- (8./9)**(-2*4)*special.gamma(4./3) * special.gamma(1.5-2*4)
- / special.gamma(3./2) / special.gamma(4./3-2*4)],
- # and some others
- # ticket #424
- [1.5, -0.5, 1.0, -10.0, 4.1300097765277476484],
- # negative integer a or b, with c-a-b integer and x > 0.9
- [-2,3,1,0.95,0.715],
- [2,-3,1,0.95,-0.007],
- [-6,3,1,0.95,0.0000810625],
- [2,-5,1,0.95,-0.000029375],
- # huge negative integers
- (10, -900, 10.5, 0.99, 1.91853705796607664803709475658e-24),
- (10, -900, -10.5, 0.99, 3.54279200040355710199058559155e-18),
- ]
- for i, (a, b, c, x, v) in enumerate(values):
- cv = special.hyp2f1(a, b, c, x)
- assert_allclose(cv, v, atol=1.5e-8, rtol=0, err_msg=f'test #{i}')
- def test_hyperu(self):
- val1 = special.hyperu(1,0.1,100)
- assert_allclose(val1, 0.0098153, atol=1.5e-7, rtol=0)
- a,b = [0.3,0.6,1.2,-2.7],[1.5,3.2,-0.4,-3.2]
- a,b = asarray(a), asarray(b)
- z = 0.5
- hypu = special.hyperu(a,b,z)
- hprl = (pi/sin(pi*b))*(special.hyp1f1(a,b,z) /
- (special.gamma(1+a-b)*special.gamma(b)) -
- z**(1-b)*special.hyp1f1(1+a-b,2-b,z)
- / (special.gamma(a)*special.gamma(2-b)))
- assert_allclose(hypu, hprl, atol=1.5e-12, rtol=0)
- def test_hyperu_gh2287(self):
- assert_allclose(special.hyperu(1, 1.5, 20.2), 0.048360918656699191,
- atol=1.5e-12, rtol=0)
- class TestBessel:
- def test_itj0y0(self):
- it0 = array(special.itj0y0(.2))
- assert_allclose(it0, array([0.19933433254006822, -0.34570883800412566]),
- atol=1.5e-8, rtol=0)
- def test_it2j0y0(self):
- it2 = array(special.it2j0y0(.2))
- assert_allclose(it2, array([0.0049937546274601858, -0.43423067011231614]),
- atol=1.5e-8, rtol=0)
- def test_negv_iv(self):
- assert_equal(special.iv(3,2), special.iv(-3,2))
- def test_j0(self):
- oz = special.j0(.1)
- ozr = special.jn(0,.1)
- assert_allclose(oz, ozr, atol=1.5e-8, rtol=0)
- def test_j1(self):
- o1 = special.j1(.1)
- o1r = special.jn(1,.1)
- assert_allclose(o1, o1r, atol=1.5e-8, rtol=0)
- def test_jn(self):
- jnnr = special.jn(1,.2)
- assert_allclose(jnnr, 0.099500832639235995, atol=1.5e-8, rtol=0)
- def test_negv_jv(self):
- assert_allclose(special.jv(-3, 2), -special.jv(3, 2), atol=1.5e-14, rtol=0)
- def test_jv(self):
- values = [[0, 0.1, 0.99750156206604002],
- [2./3, 1e-8, 0.3239028506761532e-5],
- [2./3, 1e-10, 0.1503423854873779e-6],
- [3.1, 1e-10, 0.1711956265409013e-32],
- [2./3, 4.0, -0.2325440850267039],
- ]
- for i, (v, x, y) in enumerate(values):
- yc = special.jv(v, x)
- assert_allclose(yc, y, atol=1.5e-8, rtol=0, err_msg=f'test #{i}')
- def test_negv_jve(self):
- assert_allclose(special.jve(-3, 2), -special.jve(3, 2),
- atol=1.5e-14, rtol=0)
- def test_jve(self):
- jvexp = special.jve(1,.2)
- assert_allclose(jvexp, 0.099500832639235995, atol=1.5e-8, rtol=0)
- jvexp1 = special.jve(1,.2+1j)
- z = .2+1j
- jvexpr = special.jv(1,z)*exp(-abs(z.imag))
- assert_allclose(jvexp1, jvexpr, atol=1.5e-8, rtol=0)
- def test_jn_zeros(self):
- jn0 = special.jn_zeros(0,5)
- jn1 = special.jn_zeros(1,5)
- assert_allclose(jn0, array([2.4048255577,
- 5.5200781103,
- 8.6537279129,
- 11.7915344391,
- 14.9309177086]),
- atol=1.5e-4, rtol=0)
- assert_allclose(jn1, array([3.83171,
- 7.01559,
- 10.17347,
- 13.32369,
- 16.47063]),
- atol=1.5e-4, rtol=0)
- jn102 = special.jn_zeros(102,5)
- assert_allclose(jn102, array([110.89174935992040343,
- 117.83464175788308398,
- 123.70194191713507279,
- 129.02417238949092824,
- 134.00114761868422559]), rtol=1e-13)
- jn301 = special.jn_zeros(301,5)
- assert_allclose(jn301, array([313.59097866698830153,
- 323.21549776096288280,
- 331.22338738656748796,
- 338.39676338872084500,
- 345.03284233056064157]), rtol=1e-13)
- def test_jn_zeros_slow(self):
- jn0 = special.jn_zeros(0, 300)
- assert_allclose(jn0[260-1], 816.02884495068867280, rtol=1e-13)
- assert_allclose(jn0[280-1], 878.86068707124422606, rtol=1e-13)
- assert_allclose(jn0[300-1], 941.69253065317954064, rtol=1e-13)
- jn10 = special.jn_zeros(10, 300)
- assert_allclose(jn10[260-1], 831.67668514305631151, rtol=1e-13)
- assert_allclose(jn10[280-1], 894.51275095371316931, rtol=1e-13)
- assert_allclose(jn10[300-1], 957.34826370866539775, rtol=1e-13)
- jn3010 = special.jn_zeros(3010,5)
- assert_allclose(jn3010, array([3036.86590780927,
- 3057.06598526482,
- 3073.66360690272,
- 3088.37736494778,
- 3101.86438139042]), rtol=1e-8)
- def test_jnjnp_zeros(self):
- jn = special.jn
- def jnp(n, x):
- return (jn(n-1,x) - jn(n+1,x))/2
- for nt in range(1, 30):
- z, n, m, t = special.jnjnp_zeros(nt)
- for zz, nn, tt in zip(z, n, t):
- if tt == 0:
- assert_allclose(jn(nn, zz), 0, atol=1e-6)
- elif tt == 1:
- assert_allclose(jnp(nn, zz), 0, atol=1e-6)
- else:
- raise AssertionError(f"Invalid t return for nt={nt}")
- def test_jnp_zeros(self):
- jnp = special.jnp_zeros(1,5)
- assert_allclose(jnp, array([1.84118,
- 5.33144,
- 8.53632,
- 11.70600,
- 14.86359]),
- atol=1.5e-4, rtol=0)
- jnp = special.jnp_zeros(443,5)
- assert_allclose(special.jvp(443, jnp), 0, atol=1e-15)
- def test_jnyn_zeros(self):
- jnz = special.jnyn_zeros(1, 5)
- assert_allclose(jnz, (array([3.83171,
- 7.01559,
- 10.17347,
- 13.32369,
- 16.47063]),
- array([1.84118,
- 5.33144,
- 8.53632,
- 11.70600,
- 14.86359]),
- array([2.19714,
- 5.42968,
- 8.59601,
- 11.74915,
- 14.89744]),
- array([3.68302,
- 6.94150,
- 10.12340,
- 13.28576,
- 16.44006])),
- atol=1.5e-5, rtol=0)
- def test_jvp(self):
- jvprim = special.jvp(2,2)
- jv0 = (special.jv(1,2)-special.jv(3,2))/2
- assert_allclose(jvprim, jv0, atol=1.5e-10, rtol=0)
- def test_k0(self):
- ozk = special.k0(.1)
- ozkr = special.kv(0,.1)
- assert_allclose(ozk,ozkr, atol=1.5e-8, rtol=0)
- def test_k0e(self):
- ozke = special.k0e(.1)
- ozker = special.kve(0,.1)
- assert_allclose(ozke, ozker, atol=1.5e-8, rtol=0)
- def test_k1(self):
- o1k = special.k1(.1)
- o1kr = special.kv(1,.1)
- assert_allclose(o1k,o1kr, atol=1.5e-8, rtol=0)
- def test_k1e(self):
- o1ke = special.k1e(.1)
- o1ker = special.kve(1,.1)
- assert_allclose(o1ke, o1ker, atol=1.5e-8, rtol=0)
- def test_jacobi(self):
- a = 5*np.random.random() - 1
- b = 5*np.random.random() - 1
- P0 = special.jacobi(0,a,b)
- P1 = special.jacobi(1,a,b)
- P2 = special.jacobi(2,a,b)
- P3 = special.jacobi(3,a,b)
- assert_allclose(P0.c, [1], atol=1.5e-13, rtol=0)
- assert_allclose(P1.c, array([a + b + 2, a - b]) / 2.0,
- atol=1.5e-13, rtol=0)
- cp = [(a+b+3)*(a+b+4), 4*(a+b+3)*(a+2), 4*(a+1)*(a+2)]
- p2c = [cp[0],cp[1]-2*cp[0],cp[2]-cp[1]+cp[0]]
- assert_allclose(P2.c, array(p2c) / 8.0, atol=1.5e-13, rtol=0)
- cp = [(a+b+4)*(a+b+5)*(a+b+6),6*(a+b+4)*(a+b+5)*(a+3),
- 12*(a+b+4)*(a+2)*(a+3),8*(a+1)*(a+2)*(a+3)]
- p3c = [cp[0],cp[1]-3*cp[0],cp[2]-2*cp[1]+3*cp[0],cp[3]-cp[2]+cp[1]-cp[0]]
- assert_allclose(P3.c, array(p3c) / 48.0, atol=1.5e-13, rtol=0)
- def test_kn(self):
- kn1 = special.kn(0,.2)
- assert_allclose(kn1, 1.7527038555281462, atol=1.5e-8, rtol=0)
- def test_negv_kv(self):
- assert_equal(special.kv(3.0, 2.2), special.kv(-3.0, 2.2))
- def test_kv0(self):
- kv0 = special.kv(0,.2)
- assert_allclose(kv0, 1.7527038555281462, atol=1.5e-10, rtol=0)
- def test_kv1(self):
- kv1 = special.kv(1,0.2)
- assert_allclose(kv1, 4.775972543220472, atol=1.5e-10, rtol=0)
- def test_kv2(self):
- kv2 = special.kv(2,0.2)
- assert_allclose(kv2, 49.51242928773287, atol=1.5e-10, rtol=0)
- def test_kn_largeorder(self):
- assert_allclose(special.kn(32, 1), 1.7516596664574289e+43)
- def test_kv_largearg(self):
- assert_equal(special.kv(0, 1e19), 0)
- def test_negv_kve(self):
- assert_equal(special.kve(3.0, 2.2), special.kve(-3.0, 2.2))
- def test_kve(self):
- kve1 = special.kve(0,.2)
- kv1 = special.kv(0,.2)*exp(.2)
- assert_allclose(kve1, kv1, atol=1.5e-8, rtol=0)
- z = .2+1j
- kve2 = special.kve(0,z)
- kv2 = special.kv(0,z)*exp(z)
- assert_allclose(kve2, kv2, atol=1.5e-8, rtol=0)
- def test_kvp_v0n1(self):
- z = 2.2
- assert_allclose(-special.kv(1, z), special.kvp(0, z, n=1),
- atol=1.5e-10, rtol=0)
- def test_kvp_n1(self):
- v = 3.
- z = 2.2
- xc = -special.kv(v+1,z) + v/z*special.kv(v,z)
- x = special.kvp(v,z, n=1)
- # this function (kvp) is broken
- assert_allclose(xc, x, atol=1.5e-10, rtol=0)
- def test_kvp_n2(self):
- v = 3.
- z = 2.2
- xc = (z**2+v**2-v)/z**2 * special.kv(v,z) + special.kv(v+1,z)/z
- x = special.kvp(v, z, n=2)
- assert_allclose(xc, x, atol=1.5e-10, rtol=0)
- def test_y0(self):
- oz = special.y0(.1)
- ozr = special.yn(0,.1)
- assert_allclose(oz, ozr, atol=1.5e-8, rtol=0)
- def test_y1(self):
- o1 = special.y1(.1)
- o1r = special.yn(1,.1)
- assert_allclose(o1,o1r, atol=1.5e-8, rtol=0)
- def test_y0_zeros(self):
- yo,ypo = special.y0_zeros(2)
- zo,zpo = special.y0_zeros(2,complex=1)
- all = r_[yo,zo]
- allval = r_[ypo,zpo]
- assert_allclose(abs(special.yv(0.0, all)), 0.0, atol=1.5e-11, rtol=0)
- assert_allclose(abs(special.yv(1, all) - allval), 0.0, atol=1.5e-11, rtol=0)
- def test_y1_zeros(self):
- y1 = special.y1_zeros(1)
- assert_allclose(y1, (array([2.19714]), array([0.52079])),
- atol=1.5e-5, rtol=0)
- def test_y1p_zeros(self):
- y1p = special.y1p_zeros(1,complex=1)
- assert_allclose(y1p, (array([0.5768+0.904j]), array([-0.7635+0.5892j])),
- atol=1.5e-3, rtol=0)
- def test_yn_zeros(self):
- an = special.yn_zeros(4,2)
- assert_allclose(an, array([5.64515, 9.36162]), atol=1.5e-5, rtol=0)
- an = special.yn_zeros(443,5)
- assert_allclose(an, [450.13573091578090314,
- 463.05692376675001542,
- 472.80651546418663566,
- 481.27353184725625838,
- 488.98055964441374646],
- rtol=1e-15,)
- def test_ynp_zeros(self):
- ao = special.ynp_zeros(0,2)
- assert_allclose(ao, array([2.19714133, 5.42968104]), atol=1.5e-6, rtol=0)
- ao = special.ynp_zeros(43,5)
- assert_allclose(special.yvp(43, ao), 0, atol=1e-15)
- ao = special.ynp_zeros(443,5)
- assert_allclose(special.yvp(443, ao), 0, atol=1e-9)
- def test_ynp_zeros_large_order(self):
- ao = special.ynp_zeros(443,5)
- assert_allclose(special.yvp(443, ao), 0, atol=1e-14)
- def test_yn(self):
- yn2n = special.yn(1,.2)
- assert_allclose(yn2n, -3.3238249881118471, atol=1.5e-8, rtol=0)
- def test_yn_gh_20405(self):
- # Enforce correct asymptotic behavior for large n.
- observed = cephes.yn(500, 1)
- assert observed == -np.inf
- def test_negv_yv(self):
- assert_allclose(special.yv(-3, 2), -special.yv(3, 2),
- atol=1.5e-14, rtol=0)
- def test_yv(self):
- yv2 = special.yv(1,.2)
- assert_allclose(yv2, -3.3238249881118471, atol=1.5e-8, rtol=0)
- def test_negv_yve(self):
- assert_allclose(special.yve(-3, 2), -special.yve(3, 2),
- atol=1.5e-14, rtol=0)
- def test_yve(self):
- yve2 = special.yve(1,.2)
- assert_allclose(yve2, -3.3238249881118471, atol=1.5e-8, rtol=0)
- yve2r = special.yv(1,.2+1j)*exp(-1)
- yve22 = special.yve(1,.2+1j)
- assert_allclose(yve22, yve2r, atol=1.5e-8, rtol=0)
- def test_yvp(self):
- yvpr = (special.yv(1,.2) - special.yv(3,.2))/2.0
- yvp1 = special.yvp(2,.2)
- assert_allclose(yvp1, yvpr, atol=1.5e-10, rtol=0)
- def _cephes_vs_amos_points(self):
- """Yield points at which to compare Cephes implementation to AMOS"""
- # check several points, including large-amplitude ones
- v = [-120, -100.3, -20., -10., -1., -.5, 0., 1., 12.49, 120., 301]
- z = [-1300, -11, -10, -1, 1., 10., 200.5, 401., 600.5, 700.6, 1300,
- 10003]
- yield from itertools.product(v, z)
- # check half-integers; these are problematic points at least
- # for cephes/iv
- yield from itertools.product(0.5 + arange(-60, 60), [3.5])
- def check_cephes_vs_amos(self, f1, f2, rtol=1e-11, atol=0, skip=None):
- for v, z in self._cephes_vs_amos_points():
- if skip is not None and skip(v, z):
- continue
- c1, c2, c3 = f1(v, z), f1(v,z+0j), f2(int(v), z)
- if np.isinf(c1):
- assert_(np.abs(c2) >= 1e300, (v, z))
- elif np.isnan(c1):
- assert_(c2.imag != 0, (v, z))
- else:
- assert_allclose(c1, c2, err_msg=(v, z), rtol=rtol, atol=atol)
- if v == int(v):
- assert_allclose(c3, c2, err_msg=(v, z),
- rtol=rtol, atol=atol)
- @pytest.mark.xfail(platform.machine() == 'ppc64le',
- reason="fails on ppc64le")
- def test_jv_cephes_vs_amos(self):
- self.check_cephes_vs_amos(special.jv, special.jn, rtol=1e-10, atol=1e-305)
- @pytest.mark.xfail(platform.machine() == 'ppc64le',
- reason="fails on ppc64le")
- def test_yv_cephes_vs_amos(self):
- self.check_cephes_vs_amos(special.yv, special.yn, rtol=1e-11, atol=1e-305)
- def test_yv_cephes_vs_amos_only_small_orders(self):
- def skipper(v, z):
- return abs(v) > 50
- self.check_cephes_vs_amos(special.yv, special.yn, rtol=1e-11, atol=1e-305,
- skip=skipper)
- def test_iv_cephes_vs_amos(self):
- with np.errstate(all='ignore'):
- self.check_cephes_vs_amos(special.iv, special.iv, rtol=5e-9, atol=1e-305)
- @pytest.mark.slow
- def test_iv_cephes_vs_amos_mass_test(self):
- N = 1000000
- np.random.seed(1)
- v = np.random.pareto(0.5, N) * (-1)**np.random.randint(2, size=N)
- x = np.random.pareto(0.2, N) * (-1)**np.random.randint(2, size=N)
- imsk = (np.random.randint(8, size=N) == 0)
- v[imsk] = v[imsk].astype(np.int64)
- with np.errstate(all='ignore'):
- c1 = special.iv(v, x)
- c2 = special.iv(v, x+0j)
- # deal with differences in the inf and zero cutoffs
- c1[abs(c1) > 1e300] = np.inf
- c2[abs(c2) > 1e300] = np.inf
- c1[abs(c1) < 1e-300] = 0
- c2[abs(c2) < 1e-300] = 0
- dc = abs(c1/c2 - 1)
- dc[np.isnan(dc)] = 0
- k = np.argmax(dc)
- # Most error apparently comes from AMOS and not our implementation;
- # there are some problems near integer orders there
- assert_(
- dc[k] < 2e-7,
- (v[k], x[k], special.iv(v[k], x[k]), special.iv(v[k], x[k]+0j))
- )
- def test_kv_cephes_vs_amos(self):
- self.check_cephes_vs_amos(special.kv, special.kn, rtol=1e-9, atol=1e-305)
- self.check_cephes_vs_amos(special.kv, special.kv, rtol=1e-9, atol=1e-305)
- def test_ticket_623(self):
- assert_allclose(special.jv(3, 4), 0.43017147387562193)
- assert_allclose(special.jv(301, 1300), 0.0183487151115275)
- assert_allclose(special.jv(301, 1296.0682), -0.0224174325312048)
- def test_ticket_853(self):
- """Negative-order Bessels"""
- # cephes
- assert_allclose(special.jv(-1, 1), -0.4400505857449335)
- assert_allclose(special.jv(-2, 1), 0.1149034849319005)
- assert_allclose(special.yv(-1, 1), 0.7812128213002887)
- assert_allclose(special.yv(-2, 1), -1.650682606816255)
- assert_allclose(special.iv(-1, 1), 0.5651591039924851)
- assert_allclose(special.iv(-2, 1), 0.1357476697670383)
- assert_allclose(special.kv(-1, 1), 0.6019072301972347)
- assert_allclose(special.kv(-2, 1), 1.624838898635178)
- assert_allclose(special.jv(-0.5, 1), 0.43109886801837607952)
- assert_allclose(special.yv(-0.5, 1), 0.6713967071418031)
- assert_allclose(special.iv(-0.5, 1), 1.231200214592967)
- assert_allclose(special.kv(-0.5, 1), 0.4610685044478945)
- # amos
- assert_allclose(special.jv(-1, 1+0j), -0.4400505857449335)
- assert_allclose(special.jv(-2, 1+0j), 0.1149034849319005)
- assert_allclose(special.yv(-1, 1+0j), 0.7812128213002887)
- assert_allclose(special.yv(-2, 1+0j), -1.650682606816255)
- assert_allclose(special.iv(-1, 1+0j), 0.5651591039924851)
- assert_allclose(special.iv(-2, 1+0j), 0.1357476697670383)
- assert_allclose(special.kv(-1, 1+0j), 0.6019072301972347)
- assert_allclose(special.kv(-2, 1+0j), 1.624838898635178)
- assert_allclose(special.jv(-0.5, 1+0j), 0.43109886801837607952)
- assert_allclose(special.jv(-0.5, 1+1j), 0.2628946385649065-0.827050182040562j)
- assert_allclose(special.yv(-0.5, 1+0j), 0.6713967071418031)
- assert_allclose(special.yv(-0.5, 1+1j), 0.967901282890131+0.0602046062142816j)
- assert_allclose(special.iv(-0.5, 1+0j), 1.231200214592967)
- assert_allclose(special.iv(-0.5, 1+1j), 0.77070737376928+0.39891821043561j)
- assert_allclose(special.kv(-0.5, 1+0j), 0.4610685044478945)
- assert_allclose(special.kv(-0.5, 1+1j), 0.06868578341999-0.38157825981268j)
- assert_allclose(special.jve(-0.5,1+0.3j), special.jv(-0.5, 1+0.3j)*exp(-0.3))
- assert_allclose(special.yve(-0.5,1+0.3j), special.yv(-0.5, 1+0.3j)*exp(-0.3))
- assert_allclose(special.ive(-0.5,0.3+1j), special.iv(-0.5, 0.3+1j)*exp(-0.3))
- assert_allclose(special.kve(-0.5,0.3+1j), special.kv(-0.5, 0.3+1j)*exp(0.3+1j))
- assert_allclose(
- special.hankel1(-0.5, 1+1j),
- special.jv(-0.5, 1+1j) + 1j*special.yv(-0.5,1+1j)
- )
- assert_allclose(
- special.hankel2(-0.5, 1+1j),
- special.jv(-0.5, 1+1j) - 1j*special.yv(-0.5,1+1j)
- )
- def test_ticket_854(self):
- """Real-valued Bessel domains"""
- assert_(isnan(special.jv(0.5, -1)))
- assert_(isnan(special.iv(0.5, -1)))
- assert_(isnan(special.yv(0.5, -1)))
- assert_(isnan(special.yv(1, -1)))
- assert_(isnan(special.kv(0.5, -1)))
- assert_(isnan(special.kv(1, -1)))
- assert_(isnan(special.jve(0.5, -1)))
- assert_(isnan(special.ive(0.5, -1)))
- assert_(isnan(special.yve(0.5, -1)))
- assert_(isnan(special.yve(1, -1)))
- assert_(isnan(special.kve(0.5, -1)))
- assert_(isnan(special.kve(1, -1)))
- assert_(isnan(special.airye(-1)[0:2]).all(), special.airye(-1))
- assert_(not isnan(special.airye(-1)[2:4]).any(), special.airye(-1))
- def test_gh_7909(self):
- assert_(special.kv(1.5, 0) == np.inf)
- assert_(special.kve(1.5, 0) == np.inf)
- def test_ticket_503(self):
- """Real-valued Bessel I overflow"""
- assert_allclose(special.iv(1, 700), 1.528500390233901e302)
- assert_allclose(special.iv(1000, 1120), 1.301564549405821e301)
- def test_iv_hyperg_poles(self):
- assert_allclose(special.iv(-0.5, 1), 1.231200214592967)
- def iv_series(self, v, z, n=200):
- k = arange(0, n).astype(double)
- r = (v+2*k)*log(.5*z) - special.gammaln(k+1) - special.gammaln(v+k+1)
- r[isnan(r)] = inf
- r = exp(r)
- err = abs(r).max() * finfo(double).eps * n + abs(r[-1])*10
- return r.sum(), err
- def test_i0_series(self):
- for z in [1., 10., 200.5]:
- value, err = self.iv_series(0, z)
- assert_allclose(special.i0(z), value, atol=err, err_msg=z)
- def test_i1_series(self):
- for z in [1., 10., 200.5]:
- value, err = self.iv_series(1, z)
- assert_allclose(special.i1(z), value, atol=err, err_msg=z)
- def test_iv_series(self):
- for v in [-20., -10., -1., 0., 1., 12.49, 120.]:
- for z in [1., 10., 200.5, -1+2j]:
- value, err = self.iv_series(v, z)
- assert_allclose(special.iv(v, z), value, atol=err, err_msg=(v, z))
- def test_i0(self):
- values = [[0.0, 1.0],
- [1e-10, 1.0],
- [0.1, 0.9071009258],
- [0.5, 0.6450352706],
- [1.0, 0.4657596077],
- [2.5, 0.2700464416],
- [5.0, 0.1835408126],
- [20.0, 0.0897803119],
- ]
- for i, (x, v) in enumerate(values):
- cv = special.i0(x) * exp(-x)
- assert_allclose(cv, v, atol=1.5e-8, rtol=0, err_msg=f'test #{i}')
- def test_i0e(self):
- oize = special.i0e(.1)
- oizer = special.ive(0, .1)
- assert_allclose(oize, oizer, atol=1.5e-8, rtol=0)
- def test_i1(self):
- values = [[0.0, 0.0],
- [1e-10, 0.4999999999500000e-10],
- [0.1, 0.0452984468],
- [0.5, 0.1564208032],
- [1.0, 0.2079104154],
- [5.0, 0.1639722669],
- [20.0, 0.0875062222],
- ]
- for i, (x, v) in enumerate(values):
- cv = special.i1(x) * exp(-x)
- assert_allclose(cv, v, atol=1.5e-8, rtol=0, err_msg=f'test #{i}')
- def test_i1e(self):
- oi1e = special.i1e(.1)
- oi1er = special.ive(1, .1)
- assert_allclose(oi1e, oi1er, atol=1.5e-8, rtol=0)
- def test_iti0k0(self):
- iti0 = array(special.iti0k0(5))
- assert_allclose(iti0, array([31.848667776169801, 1.5673873907283657]),
- atol=1.5e-5, rtol=0)
- def test_it2i0k0(self):
- it2k = special.it2i0k0(.1)
- assert_allclose(it2k, array([0.0012503906973464409, 3.3309450354686687]),
- atol=1.5e-6, rtol=0)
- def test_iv(self):
- iv1 = special.iv(0,.1)*exp(-.1)
- assert_allclose(iv1, 0.90710092578230106, atol=1.5e-10, rtol=0)
- def test_negv_ive(self):
- assert_equal(special.ive(3,2), special.ive(-3,2))
- def test_ive(self):
- ive1 = special.ive(0,.1)
- iv1 = special.iv(0,.1)*exp(-.1)
- assert_allclose(ive1, iv1, atol=1.5e-10, rtol=0)
- def test_ivp0(self):
- assert_allclose(special.iv(1, 2), special.ivp(0, 2), atol=1.5e-10, rtol=0)
- def test_ivp(self):
- y = (special.iv(0,2) + special.iv(2,2))/2
- x = special.ivp(1,2)
- assert_allclose(x, y, atol=1.5e-10, rtol=0)
- class TestLaguerre:
- def test_laguerre(self):
- lag0 = special.laguerre(0)
- lag1 = special.laguerre(1)
- lag2 = special.laguerre(2)
- lag3 = special.laguerre(3)
- lag4 = special.laguerre(4)
- lag5 = special.laguerre(5)
- assert_allclose(lag0.c, [1], atol=1.5e-13, rtol=0)
- assert_allclose(lag1.c, [-1, 1], atol=1.5e-13, rtol=0)
- assert_allclose(lag2.c, array([1, -4,2]) / 2.0, atol=1.5e-13, rtol=0)
- assert_allclose(lag3.c, array([-1, 9,-18,6])/6.0, atol=1.5e-13, rtol=0)
- assert_allclose(lag4.c, array([1, -16,72,-96,24])/24.0,
- atol=1.5e-13, rtol=0)
- assert_allclose(lag5.c, array([-1, 25, -200, 600, -600, 120]) / 120.0,
- atol=1.5e-13, rtol=0)
- def test_genlaguerre(self):
- k = 5*np.random.random() - 0.9
- lag0 = special.genlaguerre(0,k)
- lag1 = special.genlaguerre(1,k)
- lag2 = special.genlaguerre(2,k)
- lag3 = special.genlaguerre(3,k)
- assert_equal(lag0.c, [1])
- assert_equal(lag1.c, [-1, k + 1])
- assert_allclose(lag2.c, array([1, -2 * (k + 2), (k + 1.) * (k + 2.)]) / 2.0,
- atol=1.5e-7, rtol=0)
- expected = array([-1,
- 3 * (k + 3),
- -3 * (k + 2) * (k + 3),
- (k + 1) * (k + 2) * (k + 3)]) / 6.0
- assert_allclose(lag3.c, expected, atol=1.5e-7, rtol=0)
- class TestLambda:
- def test_lmbda(self):
- lam = special.lmbda(1,.1)
- lamr = (
- array([special.jn(0,.1), 2*special.jn(1,.1)/.1]),
- array([special.jvp(0,.1), -2*special.jv(1,.1)/.01 + 2*special.jvp(1,.1)/.1])
- )
- assert_allclose(lam, lamr, atol=1.5e-8, rtol=0)
- class TestLog1p:
- def test_log1p(self):
- l1p = (special.log1p(10), special.log1p(11), special.log1p(12))
- l1prl = (log(11), log(12), log(13))
- assert_allclose(l1p, l1prl, atol=1.5e-8, rtol=0)
- def test_log1pmore(self):
- l1pm = (special.log1p(1), special.log1p(1.1), special.log1p(1.2))
- l1pmrl = (log(2),log(2.1),log(2.2))
- assert_allclose(l1pm, l1pmrl, atol=1.5e-8, rtol=0)
- def ce_fourier_coefficient_using_integral(k, n, q):
- """
- Compute the Fourier coefficient of the even Mathieu function.
- The integral definition of a Fourier coefficient is used.
- This function is used as an alternative implementation of
- mathieu_even_coef().
- """
- period = 180 if n % 2 == 0 else 360
- # For k = 0, the factor outside the integral is (1/period).
- # For k = 1, 2, 3, ..., the factor is (2/period).
- c = (1/period)*quad(lambda t: special.mathieu_cem(n, q, t)[0],
- -period/2, period/2,
- weight='cos', wvar=2*np.pi*k/period, epsrel=1e-14)[0]
- if k > 0:
- c *= 2
- return c
- def se_fourier_coefficient_using_integral(k, n, q):
- """
- Compute the Fourier coefficient of the odd Mathieu function.
- The integral definition of a Fourier coefficient is used.
- This function is used as an alternative implementation of
- mathieu_odd_coef().
- """
- # For k == 0, the result is 0. (The test code won't call this
- # function with k == 0, but we'll check anyway.)
- if k == 0:
- return 0.0
- period = 180 if n % 2 == 0 else 360
- c = (2/period)*quad(lambda t: special.mathieu_sem(n, q, t)[0],
- -period/2, period/2,
- weight='sin', wvar=2*np.pi*k/period, epsrel=1e-14)[0]
- return c
- class TestMathieu:
- @pytest.mark.parametrize('n, q', [(4, 3.5), (8, 4.25)])
- def test_mathieu_even_coef_against_integral_n_even(self, n, q):
- # Get the nonzero Fourier coefficients. For the even Mathieu functions
- # with even n, these are the coefficients of the cosine series. None of
- # the coefficients are 0 for k = 0, 1, 2, 3, ...
- A = special.mathieu_even_coef(n, q)
- # Compare the first four nonzero Fourier coefficients to the coefficients
- # computed using the integral definition.
- c = [ce_fourier_coefficient_using_integral(k, n, q) for k in range(4)]
- assert_allclose(c, A[:len(c)], rtol=1e-10)
- @pytest.mark.parametrize('n, q', [(3, 3.5), (7, 2)])
- def test_mathieu_even_coef_against_integral_n_odd(self, n, q):
- # Get the nonzero Fourier coefficients. For the even Mathieu functions
- # with odd n, these are the coefficients of the cosine series. Only the
- # coefficients c[k] for k = 1, 3, 5, 7, ... are nonzero. These are the
- # values returned by mathieu_even_coef(n, q).
- A = special.mathieu_even_coef(n, q)
- # Compare the first 4 nonzero Fourier coefficients to the coefficients
- # computed using the integral definition.
- c = [ce_fourier_coefficient_using_integral(k, n, q) for k in range(1, 9, 2)]
- assert_allclose(c, A[:len(c)], rtol=1e-10)
- @pytest.mark.parametrize('n, q', [(2, 3.5), (10, 2)])
- def test_mathieu_odd_coef_against_integral_n_even(self, n, q):
- # Get the nonzero Fourier coefficients. For the odd Mathieu functions
- # with even n, these are the coefficients of the sine series. Only the
- # coefficients c[k] for k = 1, 2, 3, 4, ... are nonzero. These are the
- # values returned by mathieu_odd_coef(n, q).
- B = special.mathieu_odd_coef(n, q)
- # Compare the first 4 nonzero Fourier coefficients to the coefficients
- # computed using the integral definition.
- c = [se_fourier_coefficient_using_integral(k, n, q) for k in range(1, 5)]
- assert_allclose(c, B[:len(c)], rtol=1e-10)
- @pytest.mark.parametrize('n, q', [(3, 3.5), (7, 2)])
- def test_mathieu_odd_coef_against_integral_n_odd(self, n, q):
- # Get the nonzero Fourier coefficients. For the odd Mathieu functions
- # with odd n, these are the coefficients of the sine series. Only the
- # coefficients c[k] for k = 1, 3, 5, 7, ... are nonzero. These are the
- # values returned by mathieu_odd_coef(n, q).
- B = special.mathieu_odd_coef(n, q)
- # Compare the first 4 nonzero Fourier coefficients to the coefficients
- # computed using the integral definition.
- c = [se_fourier_coefficient_using_integral(k, n, q) for k in range(1, 9, 2)]
- assert_allclose(c, B[:len(c)], rtol=1e-10)
- class TestFresnelIntegral:
- def test_modfresnelp(self):
- pass
- def test_modfresnelm(self):
- pass
- class TestOblCvSeq:
- def test_obl_cv_seq(self):
- obl = special.obl_cv_seq(0,3,1)
- assert_allclose(obl, array([-0.348602,
- 1.393206,
- 5.486800,
- 11.492120]),
- atol=1.5e-5, rtol=0)
- class TestParabolicCylinder:
- def test_pbdn_seq(self):
- pb = special.pbdn_seq(1, .1)
- assert_allclose(pb, (array([0.9975,
- 0.0998]),
- array([-0.0499,
- 0.9925])),
- atol=1.5e-4, rtol=0)
- def test_pbdv(self):
- special.pbdv(1,.2)
- 1/2*(.2)*special.pbdv(1,.2)[0] - special.pbdv(0,.2)[0]
- def test_pbdv_seq(self):
- pbn = special.pbdn_seq(1,.1)
- pbv = special.pbdv_seq(1,.1)
- assert_allclose(pbv, (real(pbn[0]), real(pbn[1])), atol=1.5e-4, rtol=0)
- def test_pbdv_points(self):
- # simple case
- eta = np.linspace(-10, 10, 5)
- z = 2**(eta/2)*np.sqrt(np.pi)*special.rgamma(.5-.5*eta)
- assert_allclose(special.pbdv(eta, 0.)[0], z, rtol=1e-14, atol=1e-14)
- # some points
- assert_allclose(special.pbdv(10.34, 20.44)[0], 1.3731383034455e-32, rtol=1e-12)
- assert_allclose(special.pbdv(-9.53, 3.44)[0], 3.166735001119246e-8, rtol=1e-12)
- def test_pbdv_gradient(self):
- x = np.linspace(-4, 4, 8)[:,None]
- eta = np.linspace(-10, 10, 5)[None,:]
- p = special.pbdv(eta, x)
- eps = 1e-7 + 1e-7*abs(x)
- dp = (special.pbdv(eta, x + eps)[0] - special.pbdv(eta, x - eps)[0]) / eps / 2.
- assert_allclose(p[1], dp, rtol=1e-6, atol=1e-6)
- def test_pbvv_gradient(self):
- x = np.linspace(-4, 4, 8)[:,None]
- eta = np.linspace(-10, 10, 5)[None,:]
- p = special.pbvv(eta, x)
- eps = 1e-7 + 1e-7*abs(x)
- dp = (special.pbvv(eta, x + eps)[0] - special.pbvv(eta, x - eps)[0]) / eps / 2.
- assert_allclose(p[1], dp, rtol=1e-6, atol=1e-6)
- def test_pbvv_seq(self):
- res1, res2 = special.pbvv_seq(2, 3)
- assert_allclose(res1, np.array([2.976319645712036,
- 1.358840996329579,
- 0.5501016716383508]))
- assert_allclose(res2, np.array([3.105638472238475,
- 0.9380581512176672,
- 0.533688488872053]))
- class TestPolygamma:
- # from Table 6.2 (pg. 271) of A&S
- def test_polygamma(self):
- poly2 = special.polygamma(2, 1)
- poly3 = special.polygamma(3, 1)
- assert_allclose(poly2, -2.4041138063, atol=1.5e-10, rtol=0)
- assert_allclose(poly3, 6.4939394023, atol=1.5e-10, rtol=0)
- # Test polygamma(0, x) == psi(x)
- x = [2, 3, 1.1e14]
- assert_allclose(special.polygamma(0, x), special.psi(x),
- atol=1.5e-7, rtol=0)
- # Test broadcasting
- n = [0, 1, 2]
- x = [0.5, 1.5, 2.5]
- expected = [-1.9635100260214238, 0.93480220054467933,
- -0.23620405164172739]
- assert_allclose(special.polygamma(n, x), expected, atol=1.5e-7, rtol=0)
- expected = np.vstack([expected]*2)
- assert_allclose(special.polygamma(n, np.vstack([x]*2)), expected,
- atol=1.5e-7, rtol=0)
- assert_allclose(special.polygamma(np.vstack([n]*2), x), expected,
- atol=1.5e-7, rtol=0)
- class TestProCvSeq:
- def test_pro_cv_seq(self):
- prol = special.pro_cv_seq(0, 3, 1)
- assert_allclose(prol, array([0.319000,
- 2.593084,
- 6.533471,
- 12.514462]),
- atol=1.5e-5, rtol=0)
- class TestPsi:
- def test_psi(self):
- ps = special.psi(1)
- assert_allclose(ps, -0.57721566490153287, atol=1.5e-8, rtol=0)
- class TestRadian:
- def test_radian(self):
- rad = special.radian(90, 0, 0)
- assert_allclose(rad, pi/2.0, atol=1.5e-5, rtol=0)
- def test_radianmore(self):
- rad1 = special.radian(90, 1, 60)
- assert_allclose(rad1, pi/2 + 0.0005816135199345904, atol=1.5e-5, rtol=0)
- class TestRiccati:
- def test_riccati_jn(self):
- N, x = 2, 0.2
- S = np.empty((N, N))
- for n in range(N):
- j = special.spherical_jn(n, x)
- jp = special.spherical_jn(n, x, derivative=True)
- S[0,n] = x*j
- S[1,n] = x*jp + j
- assert_allclose(S, special.riccati_jn(n, x), atol=1.5e-8, rtol=0)
- def test_riccati_yn(self):
- N, x = 2, 0.2
- C = np.empty((N, N))
- for n in range(N):
- y = special.spherical_yn(n, x)
- yp = special.spherical_yn(n, x, derivative=True)
- C[0,n] = x*y
- C[1,n] = x*yp + y
- assert_allclose(C, special.riccati_yn(n, x), atol=1.5e-8, rtol=0)
- class TestSoftplus:
- def test_softplus(self):
- # Test cases for the softplus function. Selected based on Eq.(10) of:
- # Mächler, M. (2012). log1mexp-note.pdf. Rmpfr: R MPFR - Multiple Precision
- # Floating-Point Reliable. Retrieved from:
- # https://cran.r-project.org/web/packages/Rmpfr/vignettes/log1mexp-note.pdf
- # Reference values computed with `mpmath`
- import numpy as np
- rng = np.random.default_rng(3298432985245)
- n = 3
- a1 = rng.uniform(-100, -37, size=n)
- a2 = rng.uniform(-37, 18, size=n)
- a3 = rng.uniform(18, 33.3, size=n)
- a4 = rng.uniform(33.33, 100, size=n)
- a = np.stack([a1, a2, a3, a4])
- # from mpmath import mp
- # mp.dps = 100
- # @np.vectorize
- # def softplus(x):
- # return float(mp.log(mp.one + mp.exp(x)))
- # softplus(a).tolist()
- ref = [[1.692721323272333e-42, 7.42673911145206e-41, 8.504608846033205e-35],
- [1.8425343736349797, 9.488245799395577e-15, 7.225195764021444e-08],
- [31.253760266045106, 27.758244090327832, 29.995959179643634],
- [73.26040086468937, 76.24944728617226, 37.83955519155184]]
- res = softplus(a)
- assert_allclose(res, ref, rtol=2e-15)
- def test_softplus_with_kwargs(self):
- x = np.arange(5) - 2
- out = np.ones(5)
- ref = out.copy()
- where = x > 0
- softplus(x, out=out, where=where)
- ref[where] = softplus(x[where])
- assert_allclose(out, ref)
- class TestRound:
- def test_round(self):
- rnd = list(map(int, (special.round(10.1),
- special.round(10.4),
- special.round(10.5),
- special.round(10.6))))
- # Note: According to the documentation, scipy.special.round is
- # supposed to round to the nearest even number if the fractional
- # part is exactly 0.5. On some platforms, this does not appear
- # to work and thus this test may fail. However, this unit test is
- # correctly written.
- rndrl = (10,10,10,11)
- assert_array_equal(rnd,rndrl)
- class TestStruve:
- def _series(self, v, z, n=100):
- """Compute Struve function & error estimate from its power series."""
- k = arange(0, n)
- r = (-1)**k * (.5*z)**(2*k+v+1)/special.gamma(k+1.5)/special.gamma(k+v+1.5)
- err = abs(r).max() * finfo(double).eps * n
- return r.sum(), err
- def test_vs_series(self):
- """Check Struve function versus its power series"""
- for v in [-20, -10, -7.99, -3.4, -1, 0, 1, 3.4, 12.49, 16]:
- for z in [1, 10, 19, 21, 30]:
- value, err = self._series(v, z)
- assert_allclose(special.struve(v, z), value, rtol=0, atol=err), (v, z)
- def test_some_values(self):
- assert_allclose(special.struve(-7.99, 21), 0.0467547614113, rtol=1e-7)
- assert_allclose(special.struve(-8.01, 21), 0.0398716951023, rtol=1e-8)
- assert_allclose(special.struve(-3.0, 200), 0.0142134427432, rtol=1e-12)
- assert_allclose(special.struve(-8.0, -41), 0.0192469727846, rtol=1e-11)
- assert_equal(special.struve(-12, -41), -special.struve(-12, 41))
- assert_equal(special.struve(+12, -41), -special.struve(+12, 41))
- assert_equal(special.struve(-11, -41), +special.struve(-11, 41))
- assert_equal(special.struve(+11, -41), +special.struve(+11, 41))
- assert_(isnan(special.struve(-7.1, -1)))
- assert_(isnan(special.struve(-10.1, -1)))
- def test_regression_679(self):
- """Regression test for #679"""
- assert_allclose(special.struve(-1.0, 20 - 1e-8),
- special.struve(-1.0, 20 + 1e-8))
- assert_allclose(special.struve(-2.0, 20 - 1e-8),
- special.struve(-2.0, 20 + 1e-8))
- assert_allclose(special.struve(-4.3, 20 - 1e-8),
- special.struve(-4.3, 20 + 1e-8))
- def test_chi2_smalldf():
- assert_allclose(special.chdtr(0.6, 3), 0.957890536704110, atol=1.5e-7, rtol=0)
- def test_ch2_inf():
- assert_equal(special.chdtr(0.7,np.inf), 1.0)
- @pytest.mark.parametrize("x", [-np.inf, -1.0, -0.0, 0.0, np.inf, np.nan])
- def test_chi2_v_nan(x):
- assert np.isnan(special.chdtr(np.nan, x))
- @pytest.mark.parametrize("v", [-np.inf, -1.0, -0.0, 0.0, np.inf, np.nan])
- def test_chi2_x_nan(v):
- assert np.isnan(special.chdtr(v, np.nan))
- @pytest.mark.parametrize("x", [-np.inf, -1.0, -0.0, 0.0, np.inf, np.nan])
- def test_chi2c_v_nan(x):
- assert np.isnan(special.chdtrc(np.nan, x))
- @pytest.mark.parametrize("v", [-np.inf, -1.0, -0.0, 0.0, np.inf, np.nan])
- def test_chi2c_x_nan(v):
- assert np.isnan(special.chdtrc(v, np.nan))
- def test_chi2_edgecases_gh20972():
- # Tests that a variety of edgecases for chi square distribution functions
- # correctly return NaN when and only when they are supposed to, when
- # computed through different related ufuncs. See gh-20972.
- v = np.asarray([-0.01, 0, 0.01, 1, np.inf])[:, np.newaxis]
- x = np.asarray([-np.inf, -0.01, 0, 0.01, np.inf])
- # Check that `gammainc` is NaN when it should be and finite otherwise
- ref = special.gammainc(v / 2, x / 2)
- mask = (x < 0) | (v < 0) | (x == 0) & (v == 0) | np.isinf(v) & np.isinf(x)
- assert np.all(np.isnan(ref[mask]))
- assert np.all(np.isfinite(ref[~mask]))
- # Use `gammainc` as a reference for the rest
- assert_allclose(special.chdtr(v, x), ref)
- assert_allclose(special.gdtr(1, v / 2, x / 2), ref)
- assert_allclose(1 - special.gammaincc(v / 2, x / 2), ref)
- assert_allclose(1 - special.chdtrc(v, x), ref)
- assert_allclose(1 - special.gdtrc(1, v / 2, x / 2), ref)
- def test_chi2c_smalldf():
- assert_allclose(special.chdtrc(0.6, 3), 1 - 0.957890536704110,
- atol=1.5e-7, rtol=0)
- def test_chi2_inv_smalldf():
- assert_allclose(special.chdtri(0.6, 1 - 0.957890536704110), 3,
- atol=1.5e-7, rtol=0)
- def test_agm_simple():
- rtol = 1e-13
- # Gauss's constant
- assert_allclose(1/special.agm(1, np.sqrt(2)), 0.834626841674073186,
- rtol=rtol)
- # These values were computed using Wolfram Alpha, with the
- # function ArithmeticGeometricMean[a, b].
- agm13 = 1.863616783244897
- agm15 = 2.604008190530940
- agm35 = 3.936235503649555
- assert_allclose(special.agm([[1], [3]], [1, 3, 5]),
- [[1, agm13, agm15],
- [agm13, 3, agm35]], rtol=rtol)
- # Computed by the iteration formula using mpmath,
- # with mpmath.mp.prec = 1000:
- agm12 = 1.4567910310469068
- assert_allclose(special.agm(1, 2), agm12, rtol=rtol)
- assert_allclose(special.agm(2, 1), agm12, rtol=rtol)
- assert_allclose(special.agm(-1, -2), -agm12, rtol=rtol)
- assert_allclose(special.agm(24, 6), 13.458171481725614, rtol=rtol)
- assert_allclose(special.agm(13, 123456789.5), 11111458.498599306,
- rtol=rtol)
- assert_allclose(special.agm(1e30, 1), 2.229223055945383e+28, rtol=rtol)
- assert_allclose(special.agm(1e-22, 1), 0.030182566420169886, rtol=rtol)
- assert_allclose(special.agm(1e150, 1e180), 2.229223055945383e+178,
- rtol=rtol)
- assert_allclose(special.agm(1e180, 1e-150), 2.0634722510162677e+177,
- rtol=rtol)
- assert_allclose(special.agm(1e-150, 1e-170), 3.3112619670463756e-152,
- rtol=rtol)
- fi = np.finfo(1.0)
- assert_allclose(special.agm(fi.tiny, fi.max), 1.9892072050015473e+305,
- rtol=rtol)
- assert_allclose(special.agm(0.75*fi.max, fi.max), 1.564904312298045e+308,
- rtol=rtol)
- assert_allclose(special.agm(fi.tiny, 3*fi.tiny), 4.1466849866735005e-308,
- rtol=rtol)
- # zero, nan and inf cases.
- assert_equal(special.agm(0, 0), 0)
- assert_equal(special.agm(99, 0), 0)
- assert_equal(special.agm(-1, 10), np.nan)
- assert_equal(special.agm(0, np.inf), np.nan)
- assert_equal(special.agm(np.inf, 0), np.nan)
- assert_equal(special.agm(0, -np.inf), np.nan)
- assert_equal(special.agm(-np.inf, 0), np.nan)
- assert_equal(special.agm(np.inf, -np.inf), np.nan)
- assert_equal(special.agm(-np.inf, np.inf), np.nan)
- assert_equal(special.agm(1, np.nan), np.nan)
- assert_equal(special.agm(np.nan, -1), np.nan)
- assert_equal(special.agm(1, np.inf), np.inf)
- assert_equal(special.agm(np.inf, 1), np.inf)
- assert_equal(special.agm(-1, -np.inf), -np.inf)
- assert_equal(special.agm(-np.inf, -1), -np.inf)
- def test_legacy():
- # Legacy behavior: truncating arguments to integers
- with warnings.catch_warnings():
- warnings.filterwarnings(
- "ignore", "floating point number truncated to an integer", RuntimeWarning)
- assert_equal(special.expn(1, 0.3), special.expn(1.8, 0.3))
- assert_equal(special.nbdtrc(1, 2, 0.3), special.nbdtrc(1.8, 2.8, 0.3))
- assert_equal(special.nbdtr(1, 2, 0.3), special.nbdtr(1.8, 2.8, 0.3))
- assert_equal(special.nbdtri(1, 2, 0.3), special.nbdtri(1.8, 2.8, 0.3))
- assert_equal(special.pdtri(1, 0.3), special.pdtri(1.8, 0.3))
- assert_equal(special.kn(1, 0.3), special.kn(1.8, 0.3))
- assert_equal(special.yn(1, 0.3), special.yn(1.8, 0.3))
- assert_equal(special.smirnov(1, 0.3), special.smirnov(1.8, 0.3))
- assert_equal(special.smirnovi(1, 0.3), special.smirnovi(1.8, 0.3))
- # This lock can be removed once errstate is made thread-safe (see gh-21956)
- @pytest.fixture
- def errstate_lock():
- import threading
- return threading.Lock()
- @with_special_errors
- def test_error_raising(errstate_lock):
- with errstate_lock:
- with special.errstate(all='raise'):
- assert_raises(special.SpecialFunctionError, special.iv, 1, 1e99j)
- def test_xlogy():
- def xfunc(x, y):
- with np.errstate(invalid='ignore'):
- if x == 0 and not np.isnan(y):
- return x
- else:
- return x*np.log(y)
- z1 = np.asarray([(0,0), (0, np.nan), (0, np.inf), (1.0, 2.0)], dtype=float)
- z2 = np.r_[z1, [(0, 1j), (1, 1j)]]
- w1 = np.vectorize(xfunc)(z1[:,0], z1[:,1])
- assert_func_equal(special.xlogy, w1, z1, rtol=1e-13, atol=1e-13)
- w2 = np.vectorize(xfunc)(z2[:,0], z2[:,1])
- assert_func_equal(special.xlogy, w2, z2, rtol=1e-13, atol=1e-13)
- def test_xlog1py():
- def xfunc(x, y):
- with np.errstate(invalid='ignore'):
- if x == 0 and not np.isnan(y):
- return x
- else:
- return x * np.log1p(y)
- z1 = np.asarray([(0,0), (0, np.nan), (0, np.inf), (1.0, 2.0),
- (1, 1e-30)], dtype=float)
- w1 = np.vectorize(xfunc)(z1[:,0], z1[:,1])
- assert_func_equal(special.xlog1py, w1, z1, rtol=1e-13, atol=1e-13)
- def test_entr():
- def xfunc(x):
- if x < 0:
- return -np.inf
- else:
- return -special.xlogy(x, x)
- values = (0, 0.5, 1.0, np.inf)
- signs = [-1, 1]
- arr = []
- for sgn, v in itertools.product(signs, values):
- arr.append(sgn * v)
- z = np.array(arr, dtype=float)
- w = np.vectorize(xfunc, otypes=[np.float64])(z)
- assert_func_equal(special.entr, w, z, rtol=1e-13, atol=1e-13)
- def test_kl_div():
- def xfunc(x, y):
- if x < 0 or y < 0 or (y == 0 and x != 0):
- # extension of natural domain to preserve convexity
- return np.inf
- elif np.isposinf(x) or np.isposinf(y):
- # limits within the natural domain
- return np.inf
- elif x == 0:
- return y
- else:
- return special.xlogy(x, x/y) - x + y
- values = (0, 0.5, 1.0)
- signs = [-1, 1]
- arr = []
- for sgna, va, sgnb, vb in itertools.product(signs, values, signs, values):
- arr.append((sgna*va, sgnb*vb))
- z = np.array(arr, dtype=float)
- w = np.vectorize(xfunc, otypes=[np.float64])(z[:,0], z[:,1])
- assert_func_equal(special.kl_div, w, z, rtol=1e-13, atol=1e-13)
- def test_rel_entr():
- def xfunc(x, y):
- if x > 0 and y > 0:
- return special.xlogy(x, x/y)
- elif x == 0 and y >= 0:
- return 0
- else:
- return np.inf
- values = (0, 0.5, 1.0)
- signs = [-1, 1]
- arr = []
- for sgna, va, sgnb, vb in itertools.product(signs, values, signs, values):
- arr.append((sgna*va, sgnb*vb))
- z = np.array(arr, dtype=float)
- w = np.vectorize(xfunc, otypes=[np.float64])(z[:,0], z[:,1])
- assert_func_equal(special.rel_entr, w, z, rtol=1e-13, atol=1e-13)
- def test_rel_entr_gh_20710_near_zero():
- # Check accuracy of inputs which are very close
- inputs = np.array([
- # x, y
- (0.9456657713430001, 0.9456657713430094),
- (0.48066098564791515, 0.48066098564794774),
- (0.786048657854401, 0.7860486578542367),
- ])
- # Known values produced using `x * mpmath.log(x / y)` with dps=30
- expected = [
- -9.325873406851269e-15,
- -3.258504577274724e-14,
- 1.6431300764454033e-13,
- ]
- x = inputs[:, 0]
- y = inputs[:, 1]
- assert_allclose(special.rel_entr(x, y), expected, rtol=1e-13, atol=0)
- def test_rel_entr_gh_20710_overflow():
- special.seterr(all='ignore')
- inputs = np.array([
- # x, y
- # Overflow
- (4, 2.22e-308),
- # Underflow
- (1e-200, 1e+200),
- # Subnormal
- (2.22e-308, 1e15),
- ])
- # Known values produced using `x * mpmath.log(x / y)` with dps=30
- expected = [
- 2839.139983229607,
- -9.210340371976183e-198,
- -1.6493212008074475e-305,
- ]
- x = inputs[:, 0]
- y = inputs[:, 1]
- assert_allclose(special.rel_entr(x, y), expected, rtol=1e-13, atol=0)
- def test_huber():
- assert_equal(special.huber(-1, 1.5), np.inf)
- assert_allclose(special.huber(2, 1.5), 0.5 * np.square(1.5))
- assert_allclose(special.huber(2, 2.5), 2 * (2.5 - 0.5 * 2))
- def xfunc(delta, r):
- if delta < 0:
- return np.inf
- elif np.abs(r) < delta:
- return 0.5 * np.square(r)
- else:
- return delta * (np.abs(r) - 0.5 * delta)
- z = np.random.randn(10, 2)
- w = np.vectorize(xfunc, otypes=[np.float64])(z[:,0], z[:,1])
- assert_func_equal(special.huber, w, z, rtol=1e-13, atol=1e-13)
- def test_pseudo_huber():
- def xfunc(delta, r):
- if delta < 0:
- return np.inf
- elif (not delta) or (not r):
- return 0
- else:
- return delta**2 * (np.sqrt(1 + (r/delta)**2) - 1)
- z = np.array(np.random.randn(10, 2).tolist() + [[0, 0.5], [0.5, 0]])
- w = np.vectorize(xfunc, otypes=[np.float64])(z[:,0], z[:,1])
- assert_func_equal(special.pseudo_huber, w, z, rtol=1e-13, atol=1e-13)
- def test_pseudo_huber_small_r():
- delta = 1.0
- r = 1e-18
- y = special.pseudo_huber(delta, r)
- # expected computed with mpmath:
- # import mpmath
- # mpmath.mp.dps = 200
- # r = mpmath.mpf(1e-18)
- # expected = float(mpmath.sqrt(1 + r**2) - 1)
- expected = 5.0000000000000005e-37
- assert_allclose(y, expected, rtol=1e-13)
- def test_runtime_warning():
- with pytest.warns(RuntimeWarning,
- match=r'Too many predicted coefficients'):
- mathieu_odd_coef(1000, 1000)
- with pytest.warns(RuntimeWarning,
- match=r'Too many predicted coefficients'):
- mathieu_even_coef(1000, 1000)
- class TestStirling2:
- table = [
- [1],
- [0, 1],
- [0, 1, 1],
- [0, 1, 3, 1],
- [0, 1, 7, 6, 1],
- [0, 1, 15, 25, 10, 1],
- [0, 1, 31, 90, 65, 15, 1],
- [0, 1, 63, 301, 350, 140, 21, 1],
- [0, 1, 127, 966, 1701, 1050, 266, 28, 1],
- [0, 1, 255, 3025, 7770, 6951, 2646, 462, 36, 1],
- [0, 1, 511, 9330, 34105, 42525, 22827, 5880, 750, 45, 1],
- ]
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-12})
- ])
- def test_table_cases(self, is_exact, comp, kwargs):
- for n in range(1, len(self.table)):
- k_values = list(range(n+1))
- row = self.table[n]
- comp(row, stirling2([n], k_values, exact=is_exact), **kwargs)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-12})
- ])
- def test_valid_single_integer(self, is_exact, comp, kwargs):
- comp(stirling2(0, 0, exact=is_exact), self.table[0][0], **kwargs)
- comp(stirling2(4, 2, exact=is_exact), self.table[4][2], **kwargs)
- # a single 2-tuple of integers as arguments must return an int and not
- # an array whereas arrays of single values should return array
- comp(stirling2(5, 3, exact=is_exact), 25, **kwargs)
- comp(stirling2([5], [3], exact=is_exact), [25], **kwargs)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-12})
- ])
- def test_negative_integer(self, is_exact, comp, kwargs):
- # negative integers for n or k arguments return 0
- comp(stirling2(-1, -1, exact=is_exact), 0, **kwargs)
- comp(stirling2(-1, 2, exact=is_exact), 0, **kwargs)
- comp(stirling2(2, -1, exact=is_exact), 0, **kwargs)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-12})
- ])
- def test_array_inputs(self, is_exact, comp, kwargs):
- ans = [self.table[10][3], self.table[10][4]]
- comp(stirling2(asarray([10, 10]),
- asarray([3, 4]),
- exact=is_exact),
- ans)
- comp(stirling2([10, 10],
- asarray([3, 4]),
- exact=is_exact),
- ans)
- comp(stirling2(asarray([10, 10]),
- [3, 4],
- exact=is_exact),
- ans)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-13})
- ])
- def test_mixed_values(self, is_exact, comp, kwargs):
- # negative values-of either n or k-should return 0 for the entry
- ans = [0, 1, 3, 25, 1050, 5880, 9330]
- n = [-1, 0, 3, 5, 8, 10, 10]
- k = [-2, 0, 2, 3, 5, 7, 3]
- comp(stirling2(n, k, exact=is_exact), ans, **kwargs)
- def test_correct_parity(self):
- """Test parity follows well known identity.
- en.wikipedia.org/wiki/Stirling_numbers_of_the_second_kind#Parity
- """
- n, K = 100, np.arange(101)
- assert_equal(
- stirling2(n, K, exact=True) % 2,
- [math.comb(n - (k // 2) - 1, n - k) % 2 for k in K],
- )
- def test_big_numbers(self):
- # via mpmath (bigger than 32bit)
- ans = asarray([48063331393110, 48004081105038305])
- n = [25, 30]
- k = [17, 4]
- assert array_equal(stirling2(n, k, exact=True), ans)
- # bigger than 64 bit
- ans = asarray([2801934359500572414253157841233849412,
- 14245032222277144547280648984426251])
- n = [42, 43]
- k = [17, 23]
- assert array_equal(stirling2(n, k, exact=True), ans)
- @pytest.mark.parametrize("N", [4.5, 3., 4+1j, "12", np.nan])
- @pytest.mark.parametrize("K", [3.5, 3, "2", None])
- @pytest.mark.parametrize("is_exact", [True, False])
- def test_unsupported_input_types(self, N, K, is_exact):
- # object, float, string, complex are not supported and raise TypeError
- with pytest.raises(TypeError):
- stirling2(N, K, exact=is_exact)
- @pytest.mark.parametrize("is_exact", [True, False])
- def test_numpy_array_int_object_dtype(self, is_exact):
- # python integers with arbitrary precision are *not* allowed as
- # object type in numpy arrays are inconsistent from api perspective
- ans = asarray(self.table[4][1:])
- n = asarray([4, 4, 4, 4], dtype=object)
- k = asarray([1, 2, 3, 4], dtype=object)
- with pytest.raises(TypeError):
- array_equal(stirling2(n, k, exact=is_exact), ans)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-13})
- ])
- def test_numpy_array_unsigned_int_dtype(self, is_exact, comp, kwargs):
- # numpy unsigned integers are allowed as dtype in numpy arrays
- ans = asarray(self.table[4][1:])
- n = asarray([4, 4, 4, 4], dtype=np_ulong)
- k = asarray([1, 2, 3, 4], dtype=np_ulong)
- comp(stirling2(n, k, exact=False), ans, **kwargs)
- @pytest.mark.parametrize("is_exact, comp, kwargs", [
- (True, assert_equal, {}),
- (False, assert_allclose, {'rtol': 1e-13})
- ])
- def test_broadcasting_arrays_correctly(self, is_exact, comp, kwargs):
- # broadcasting is handled by stirling2
- # test leading 1s are replicated
- ans = asarray([[1, 15, 25, 10], [1, 7, 6, 1]]) # shape (2,4)
- n = asarray([[5, 5, 5, 5], [4, 4, 4, 4]]) # shape (2,4)
- k = asarray([1, 2, 3, 4]) # shape (4,)
- comp(stirling2(n, k, exact=is_exact), ans, **kwargs)
- # test that dims both mismatch broadcast correctly (5,1) & (6,)
- n = asarray([[4], [4], [4], [4], [4]])
- k = asarray([0, 1, 2, 3, 4, 5])
- ans = asarray([[0, 1, 7, 6, 1, 0] for _ in range(5)])
- comp(stirling2(n, k, exact=False), ans, **kwargs)
- def test_temme_rel_max_error(self):
- # python integers with arbitrary precision are *not* allowed as
- # object type in numpy arrays are inconsistent from api perspective
- x = list(range(51, 101, 5))
- for n in x:
- k_entries = list(range(1, n+1))
- denom = stirling2([n], k_entries, exact=True)
- num = denom - stirling2([n], k_entries, exact=False)
- assert np.max(np.abs(num / denom)) < 2e-5
|