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- import numpy as np
- from scipy._lib._array_api import (
- is_cupy, is_numpy,
- xp_assert_close, xp_assert_equal, assert_array_almost_equal,
- make_xp_test_case,
- make_xp_pytest_param,
- )
- import pytest
- from pytest import raises as assert_raises
- from scipy import ndimage
- from . import types
- skip_xp_backends = pytest.mark.skip_xp_backends
- xfail_xp_backends = pytest.mark.xfail_xp_backends
- class TestNdimageMorphology:
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- # brute force (bf) distance transform
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_bf(data, 'euclidean',
- return_indices=True)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 2, 4, 2, 1, 0, 0],
- [0, 0, 1, 4, 8, 4, 1, 0, 0],
- [0, 0, 1, 2, 4, 2, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(out * out, expected)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 2, 1, 2, 2, 2, 2],
- [3, 3, 3, 2, 1, 2, 3, 3, 3],
- [4, 4, 4, 4, 6, 4, 4, 4, 4],
- [5, 5, 6, 6, 7, 6, 6, 5, 5],
- [6, 6, 6, 7, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 1, 2, 4, 6, 7, 7, 8],
- [0, 1, 1, 1, 6, 7, 7, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_bf(data, 'cityblock',
- return_indices=True)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 2, 2, 2, 1, 0, 0],
- [0, 0, 1, 2, 3, 2, 1, 0, 0],
- [0, 0, 1, 2, 2, 2, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(out, expected)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 2, 1, 2, 2, 2, 2],
- [3, 3, 3, 3, 1, 3, 3, 3, 3],
- [4, 4, 4, 4, 7, 4, 4, 4, 4],
- [5, 5, 6, 7, 7, 7, 6, 5, 5],
- [6, 6, 6, 7, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 1, 1, 4, 7, 7, 7, 8],
- [0, 1, 1, 1, 4, 7, 7, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_bf(data, 'chessboard',
- return_indices=True)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 2, 1, 1, 0, 0],
- [0, 0, 1, 2, 2, 2, 1, 0, 0],
- [0, 0, 1, 1, 2, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(out, expected)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 2, 1, 2, 2, 2, 2],
- [3, 3, 4, 2, 2, 2, 4, 3, 3],
- [4, 4, 5, 6, 6, 6, 5, 4, 4],
- [5, 5, 6, 6, 7, 6, 6, 5, 5],
- [6, 6, 6, 7, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 5, 6, 6, 7, 8],
- [0, 1, 1, 2, 6, 6, 7, 7, 8],
- [0, 1, 1, 2, 6, 7, 7, 7, 8],
- [0, 1, 2, 2, 6, 6, 7, 7, 8],
- [0, 1, 2, 4, 5, 6, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @skip_xp_backends(
- np_only=True, reason='inplace distances= arrays are numpy-specific'
- )
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf04(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- tdt, tft = ndimage.distance_transform_bf(data, return_indices=1)
- dts = []
- fts = []
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ndimage.distance_transform_bf(data, distances=dt)
- dts.append(dt)
- ft = ndimage.distance_transform_bf(
- data, return_distances=False, return_indices=1)
- fts.append(ft)
- ft = np.indices(data.shape, dtype=xp.int32)
- ndimage.distance_transform_bf(
- data, return_distances=False, return_indices=True, indices=ft)
- fts.append(ft)
- dt, ft = ndimage.distance_transform_bf(
- data, return_indices=1)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ft = ndimage.distance_transform_bf(
- data, distances=dt, return_indices=True)
- dts.append(dt)
- fts.append(ft)
- ft = np.indices(data.shape, dtype=xp.int32)
- dt = ndimage.distance_transform_bf(
- data, return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ft = np.indices(data.shape, dtype=xp.int32)
- ndimage.distance_transform_bf(
- data, distances=dt, return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- for dt in dts:
- assert_array_almost_equal(tdt, dt)
- for ft in fts:
- assert_array_almost_equal(tft, ft)
- @xfail_xp_backends('cupy', reason='CuPy does not have distance_transform_bf')
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf05(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_bf(
- data, 'euclidean', return_indices=True, sampling=[2, 2])
- expected = [[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 4, 4, 4, 0, 0, 0],
- [0, 0, 4, 8, 16, 8, 4, 0, 0],
- [0, 0, 4, 16, 32, 16, 4, 0, 0],
- [0, 0, 4, 8, 16, 8, 4, 0, 0],
- [0, 0, 0, 4, 4, 4, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(out * out, expected)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 2, 1, 2, 2, 2, 2],
- [3, 3, 3, 2, 1, 2, 3, 3, 3],
- [4, 4, 4, 4, 6, 4, 4, 4, 4],
- [5, 5, 6, 6, 7, 6, 6, 5, 5],
- [6, 6, 6, 7, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 1, 2, 4, 6, 7, 7, 8],
- [0, 1, 1, 1, 6, 7, 7, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @make_xp_test_case(ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_bf06(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_bf(
- data, 'euclidean', return_indices=True, sampling=[2, 1])
- expected = [[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 4, 1, 0, 0, 0],
- [0, 0, 1, 4, 8, 4, 1, 0, 0],
- [0, 0, 1, 4, 9, 4, 1, 0, 0],
- [0, 0, 1, 4, 8, 4, 1, 0, 0],
- [0, 0, 0, 1, 4, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(out * out, expected)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 2, 2, 2, 2, 2, 2],
- [3, 3, 3, 3, 2, 3, 3, 3, 3],
- [4, 4, 4, 4, 4, 4, 4, 4, 4],
- [5, 5, 5, 5, 6, 5, 5, 5, 5],
- [6, 6, 6, 6, 7, 6, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 6, 6, 6, 7, 8],
- [0, 1, 1, 1, 6, 7, 7, 7, 8],
- [0, 1, 1, 1, 7, 7, 7, 7, 8],
- [0, 1, 1, 1, 6, 7, 7, 7, 8],
- [0, 1, 2, 2, 4, 6, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @make_xp_test_case(ndimage.distance_transform_bf)
- def test_distance_transform_bf07(self, xp):
- # test input validation per discussion on PR #13302
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]])
- with assert_raises(RuntimeError):
- ndimage.distance_transform_bf(
- data, return_distances=False, return_indices=False
- )
- @make_xp_test_case(ndimage.distance_transform_bf,
- ndimage.distance_transform_cdt)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_cdt01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- # chamfer type distance (cdt) transform
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_cdt(
- data, 'cityblock', return_indices=True)
- bf = ndimage.distance_transform_bf(data, 'cityblock')
- assert_array_almost_equal(bf, out)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 1, 1, 1, 2, 2, 2],
- [3, 3, 2, 1, 1, 1, 2, 3, 3],
- [4, 4, 4, 4, 1, 4, 4, 4, 4],
- [5, 5, 5, 5, 7, 7, 6, 5, 5],
- [6, 6, 6, 6, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 1, 1, 4, 7, 7, 7, 8],
- [0, 1, 1, 1, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @make_xp_test_case(ndimage.distance_transform_bf,
- ndimage.distance_transform_cdt)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_cdt02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_cdt(data, 'chessboard',
- return_indices=True)
- bf = ndimage.distance_transform_bf(data, 'chessboard')
- assert_array_almost_equal(bf, out)
- expected = [[[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 1, 1],
- [2, 2, 2, 1, 1, 1, 2, 2, 2],
- [3, 3, 2, 2, 1, 2, 2, 3, 3],
- [4, 4, 3, 2, 2, 2, 3, 4, 4],
- [5, 5, 4, 6, 7, 6, 4, 5, 5],
- [6, 6, 6, 6, 7, 7, 6, 6, 6],
- [7, 7, 7, 7, 7, 7, 7, 7, 7],
- [8, 8, 8, 8, 8, 8, 8, 8, 8]],
- [[0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 2, 3, 4, 6, 7, 8],
- [0, 1, 1, 2, 2, 6, 6, 7, 8],
- [0, 1, 1, 1, 2, 6, 7, 7, 8],
- [0, 1, 1, 2, 6, 6, 7, 7, 8],
- [0, 1, 2, 2, 5, 6, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8],
- [0, 1, 2, 3, 4, 5, 6, 7, 8]]]
- expected = xp.asarray(expected)
- assert_array_almost_equal(ft, expected)
- @skip_xp_backends(
- np_only=True, reason='inplace indices= arrays are numpy-specific'
- )
- @make_xp_test_case(ndimage.distance_transform_cdt)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_cdt03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- tdt, tft = ndimage.distance_transform_cdt(data, return_indices=True)
- dts = []
- fts = []
- dt = xp.zeros(data.shape, dtype=xp.int32)
- ndimage.distance_transform_cdt(data, distances=dt)
- dts.append(dt)
- ft = ndimage.distance_transform_cdt(
- data, return_distances=False, return_indices=True)
- fts.append(ft)
- ft = xp.asarray(np.indices(data.shape, dtype=np.int32))
- ndimage.distance_transform_cdt(
- data, return_distances=False, return_indices=True, indices=ft)
- fts.append(ft)
- dt, ft = ndimage.distance_transform_cdt(
- data, return_indices=True)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.int32)
- ft = ndimage.distance_transform_cdt(
- data, distances=dt, return_indices=True)
- dts.append(dt)
- fts.append(ft)
- ft = xp.asarray(np.indices(data.shape, dtype=np.int32))
- dt = ndimage.distance_transform_cdt(
- data, return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.int32)
- ft = xp.asarray(np.indices(data.shape, dtype=np.int32))
- ndimage.distance_transform_cdt(data, distances=dt,
- return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- for dt in dts:
- assert_array_almost_equal(tdt, dt)
- for ft in fts:
- assert_array_almost_equal(tft, ft)
- @skip_xp_backends(
- np_only=True, reason='XXX: does not raise unless indices is a numpy array'
- )
- @make_xp_test_case(ndimage.distance_transform_cdt)
- def test_distance_transform_cdt04(self, xp):
- # test input validation per discussion on PR #13302
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]])
- indices_out = xp.zeros((data.ndim,) + data.shape, dtype=xp.int32)
- with assert_raises(RuntimeError):
- ndimage.distance_transform_bf(
- data,
- return_distances=True,
- return_indices=False,
- indices=indices_out
- )
- @xfail_xp_backends("torch", reason="int overflow")
- @make_xp_test_case(ndimage.distance_transform_cdt)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_cdt05(self, dtype, xp):
- dtype = getattr(xp, dtype)
- # test custom metric type per discussion on issue #17381
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- metric_arg = xp.ones((3, 3))
- actual = ndimage.distance_transform_cdt(data, metric=metric_arg)
- assert xp.sum(actual) == -21
- @skip_xp_backends("cupy", reason="CuPy does not have distance_transform_bf")
- @make_xp_test_case(ndimage.distance_transform_edt,
- ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_edt01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- # euclidean distance transform (edt)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out, ft = ndimage.distance_transform_edt(data, return_indices=True)
- bf = ndimage.distance_transform_bf(data, 'euclidean')
- assert_array_almost_equal(bf, out)
- # np-specific check
- np_ft = np.asarray(ft)
- dt = np_ft - np.indices(np_ft.shape[1:], dtype=np_ft.dtype)
- dt = dt.astype(np.float64)
- np.multiply(dt, dt, dt)
- dt = np.add.reduce(dt, axis=0)
- np.sqrt(dt, dt)
- dt = xp.asarray(dt)
- assert_array_almost_equal(bf, dt)
- @skip_xp_backends(
- np_only=True, reason='inplace distances= are numpy-specific'
- )
- @make_xp_test_case(ndimage.distance_transform_edt,
- ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_edt02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- tdt, tft = ndimage.distance_transform_edt(data, return_indices=True)
- dts = []
- fts = []
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ndimage.distance_transform_edt(data, distances=dt)
- dts.append(dt)
- ft = ndimage.distance_transform_edt(
- data, return_distances=0, return_indices=True)
- fts.append(ft)
- ft = np.indices(data.shape, dtype=xp.int32)
- ft = xp.asarray(ft)
- ndimage.distance_transform_edt(
- data, return_distances=False, return_indices=True, indices=ft)
- fts.append(ft)
- dt, ft = ndimage.distance_transform_edt(
- data, return_indices=True)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ft = ndimage.distance_transform_edt(
- data, distances=dt, return_indices=True)
- dts.append(dt)
- fts.append(ft)
- ft = np.indices(data.shape, dtype=xp.int32)
- ft = xp.asarray(ft)
- dt = ndimage.distance_transform_edt(
- data, return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- dt = xp.zeros(data.shape, dtype=xp.float64)
- ft = np.indices(data.shape, dtype=xp.int32)
- ft = xp.asarray(ft)
- ndimage.distance_transform_edt(
- data, distances=dt, return_indices=True, indices=ft)
- dts.append(dt)
- fts.append(ft)
- for dt in dts:
- assert_array_almost_equal(tdt, dt)
- for ft in fts:
- assert_array_almost_equal(tft, ft)
- @make_xp_test_case(ndimage.distance_transform_edt,
- ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_edt03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- ref = ndimage.distance_transform_bf(data, 'euclidean', sampling=[2, 2])
- out = ndimage.distance_transform_edt(data, sampling=[2, 2])
- assert_array_almost_equal(out, ref)
- @make_xp_test_case(ndimage.distance_transform_edt,
- ndimage.distance_transform_bf)
- @pytest.mark.parametrize('dtype', types)
- def test_distance_transform_edt4(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- ref = ndimage.distance_transform_bf(data, 'euclidean', sampling=[2, 1])
- out = ndimage.distance_transform_edt(data, sampling=[2, 1])
- assert_array_almost_equal(out, ref)
- @xfail_xp_backends(
- "cupy", reason="Only 2D and 3D distance transforms are supported in CuPy"
- )
- @make_xp_test_case(ndimage.distance_transform_edt)
- def test_distance_transform_edt5(self, xp):
- # Ticket #954 regression test
- out = ndimage.distance_transform_edt(xp.asarray(False))
- assert_array_almost_equal(out, xp.asarray([0.]))
- @xfail_xp_backends(
- np_only=True, reason='XXX: does not raise unless indices is a numpy array'
- )
- @make_xp_test_case(ndimage.distance_transform_edt)
- def test_distance_transform_edt6(self, xp):
- # test input validation per discussion on PR #13302
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0, 0]])
- distances_out = xp.zeros(data.shape, dtype=xp.float64)
- with assert_raises(RuntimeError):
- ndimage.distance_transform_bf(
- data,
- return_indices=True,
- return_distances=False,
- distances=distances_out
- )
- @make_xp_test_case(ndimage.generate_binary_structure)
- def test_generate_structure01(self, xp):
- struct = ndimage.generate_binary_structure(0, 1)
- assert struct == 1
- @make_xp_test_case(ndimage.generate_binary_structure)
- def test_generate_structure02(self, xp):
- struct = ndimage.generate_binary_structure(1, 1)
- assert_array_almost_equal(struct, [1, 1, 1])
- @make_xp_test_case(ndimage.generate_binary_structure)
- def test_generate_structure03(self, xp):
- struct = ndimage.generate_binary_structure(2, 1)
- assert_array_almost_equal(struct, [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]])
- @make_xp_test_case(ndimage.generate_binary_structure)
- def test_generate_structure04(self, xp):
- struct = ndimage.generate_binary_structure(2, 2)
- assert_array_almost_equal(struct, [[1, 1, 1],
- [1, 1, 1],
- [1, 1, 1]])
- @make_xp_test_case(ndimage.iterate_structure)
- def test_iterate_structure01(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- out = ndimage.iterate_structure(struct, 2)
- expected = np.asarray([[0, 0, 1, 0, 0],
- [0, 1, 1, 1, 0],
- [1, 1, 1, 1, 1],
- [0, 1, 1, 1, 0],
- [0, 0, 1, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.iterate_structure)
- def test_iterate_structure02(self, xp):
- struct = [[0, 1],
- [1, 1],
- [0, 1]]
- struct = xp.asarray(struct)
- out = ndimage.iterate_structure(struct, 2)
- expected = np.asarray([[0, 0, 1],
- [0, 1, 1],
- [1, 1, 1],
- [0, 1, 1],
- [0, 0, 1]], dtype=bool)
- expected = xp.asarray(expected)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.iterate_structure)
- def test_iterate_structure03(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- out = ndimage.iterate_structure(struct, 2, 1)
- expected = [[0, 0, 1, 0, 0],
- [0, 1, 1, 1, 0],
- [1, 1, 1, 1, 1],
- [0, 1, 1, 1, 0],
- [0, 0, 1, 0, 0]]
- expected = np.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- assert_array_almost_equal(out[0], expected)
- assert out[1] == [2, 2]
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert out == xp.asarray(1, dtype=out.dtype)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert out == xp.asarray(1, dtype=out.dtype)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([0]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion04(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion05(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([0, 1, 0]))
- @xfail_xp_backends("cupy", reason="https://github.com/cupy/cupy/issues/8912")
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion05_broadcasted(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones((1, ), dtype=dtype)
- data = xp.broadcast_to(data, (3, ))
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([0, 1, 0]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion06(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion07(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([5], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([0, 1, 1, 1, 0]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion08(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([5], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1, 1, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion09(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([0, 0, 0, 0, 0]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion10(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 0, 0, 0, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion11(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_erosion(data, struct, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 0, 1, 0, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion12(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_erosion(data, struct, border_value=1, origin=-1)
- assert_array_almost_equal(out, xp.asarray([0, 1, 0, 1, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion13(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_erosion(data, struct, border_value=1, origin=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 0, 1, 0]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion14(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- struct = xp.asarray([1, 1])
- out = ndimage.binary_erosion(data, struct, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 0, 0, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion15(self, dtype, xp):
- data = np.ones([5], dtype=dtype)
- data[2] = 0
- data = xp.asarray(data)
- struct = xp.asarray([1, 1])
- out = ndimage.binary_erosion(data, struct, border_value=1, origin=-1)
- assert_array_almost_equal(out, xp.asarray([1, 0, 0, 1, 1]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion16(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 1], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([[1]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion17(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 1], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([[0]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion18(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 3], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([[0, 0, 0]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion19(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 3], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([[1, 1, 1]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion20(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3, 3], dtype=dtype)
- out = ndimage.binary_erosion(data)
- assert_array_almost_equal(out, xp.asarray([[0, 0, 0],
- [0, 1, 0],
- [0, 0, 0]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion21(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3, 3], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, xp.asarray([[1, 1, 1],
- [1, 1, 1],
- [1, 1, 1]]))
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion22(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_erosion(data, border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion23(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = ndimage.generate_binary_structure(2, 2)
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_erosion(data, struct, border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion24(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = xp.asarray([[0, 1],
- [1, 1]])
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 0, 0, 0, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 1, 1],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_erosion(data, struct, border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion25(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = [[0, 1, 0],
- [1, 0, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 0, 1, 1],
- [0, 0, 1, 0, 1, 1, 0, 0],
- [0, 1, 0, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_erosion(data, struct, border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_erosion)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_erosion26(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = [[0, 1, 0],
- [1, 0, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 1],
- [0, 0, 0, 0, 1, 0, 0, 1],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 1]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 0, 1, 1],
- [0, 0, 1, 0, 1, 1, 0, 0],
- [0, 1, 0, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_erosion(data, struct, border_value=1,
- origin=(-1, -1))
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends(
- "cupy", reason="CuPy: NotImplementedError: only brute_force iteration"
- )
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion27(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, struct, border_value=1,
- iterations=2)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion28(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = np.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=2, output=out)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends(
- "cupy", reason="CuPy: NotImplementedError: only brute_force iteration"
- )
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion29(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, struct,
- border_value=1, iterations=3)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion30(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = np.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=3, output=out)
- assert_array_almost_equal(out, expected)
- # test with output memory overlap
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=3, output=data)
- assert_array_almost_equal(data, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion31(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 1, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 0, 0],
- [1, 1, 1, 1, 1, 0, 1],
- [0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 1]]
- expected = np.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=1, output=out, origin=(-1, -1))
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion32(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, struct,
- border_value=1, iterations=2)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion33(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 1, 1],
- [0, 0, 0, 0, 0, 0, 1],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- mask = [[1, 1, 1, 1, 1, 0, 0],
- [1, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1]]
- mask = xp.asarray(mask)
- data = np.asarray([[0, 0, 0, 0, 0, 1, 1],
- [0, 0, 0, 1, 0, 0, 1],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, struct,
- border_value=1, mask=mask, iterations=-1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion34(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- mask = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 0, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- mask = xp.asarray(mask)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_erosion(data, struct,
- border_value=1, mask=mask)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion35(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- mask = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 0, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- mask = np.asarray(mask, dtype=bool)
- mask = xp.asarray(mask)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- tmp = [[0, 0, 1, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 0, 0],
- [1, 1, 1, 1, 1, 0, 1],
- [0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 1]]
- tmp = np.asarray(tmp, dtype=bool)
- tmp = xp.asarray(tmp)
- expected = xp.logical_and(tmp, mask)
- tmp = xp.logical_and(data, xp.logical_not(mask))
- expected = xp.logical_or(expected, tmp)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=1, output=out,
- origin=(-1, -1), mask=mask)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion36(self, xp):
- struct = [[0, 1, 0],
- [1, 0, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- mask = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- mask = np.asarray(mask, dtype=bool)
- mask = xp.asarray(mask)
- tmp = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 1],
- [0, 0, 0, 0, 1, 0, 0, 1],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 1]]
- tmp = np.asarray(tmp, dtype=bool)
- tmp = xp.asarray(tmp)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 1, 1],
- [0, 0, 1, 1, 1, 0, 1, 1],
- [0, 0, 1, 0, 1, 1, 0, 0],
- [0, 1, 0, 1, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- expected = xp.logical_and(tmp, mask)
- tmp = xp.logical_and(data, xp.logical_not(mask))
- expected = xp.logical_or(expected, tmp)
- out = ndimage.binary_erosion(data, struct, mask=mask,
- border_value=1, origin=(-1, -1))
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion37(self, xp):
- a = np.asarray([[1, 0, 1],
- [0, 1, 0],
- [1, 0, 1]], dtype=bool)
- a = xp.asarray(a)
- b = xp.zeros_like(a)
- out = ndimage.binary_erosion(a, structure=a, output=b, iterations=0,
- border_value=True, brute_force=True)
- assert out is b
- xp_assert_equal(
- ndimage.binary_erosion(a, structure=a, iterations=0,
- border_value=True),
- b)
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion38(self, xp):
- data = np.asarray([[1, 0, 1],
- [0, 1, 0],
- [1, 0, 1]], dtype=bool)
- data = xp.asarray(data)
- iterations = 2.0
- with assert_raises(TypeError):
- _ = ndimage.binary_erosion(data, iterations=iterations)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion39(self, xp):
- iterations = np.int32(3)
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=iterations, output=out)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace out= arguments are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion40(self, xp):
- iterations = np.int64(3)
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0]]
- expected = np.asarray(expected, dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [1, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_erosion(data, struct, border_value=1,
- iterations=iterations, output=out)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert out == xp.asarray(1, dtype=out.dtype)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.zeros([], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert out == xp.asarray(False)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1], dtype=out.dtype))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation04(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.zeros([1], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation05(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation05_broadcasted(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones((1, ), dtype=dtype)
- data = xp.broadcast_to(data, (3,))
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation06(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.zeros([3], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([0, 0, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation07(self, dtype, xp):
- data = np.zeros([3], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation08(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data[3] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1, 1, 1]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation09(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([1, 1, 1, 0, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation10(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, origin=-1)
- assert_array_almost_equal(out, xp.asarray([0, 1, 1, 1, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation11(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, origin=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 0, 0, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation12(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_dilation(data, struct)
- assert_array_almost_equal(out, xp.asarray([1, 0, 1, 0, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation13(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_dilation(data, struct, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 0, 1, 0, 1]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation14(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_dilation(data, struct, origin=-1)
- assert_array_almost_equal(out, xp.asarray([0, 1, 0, 1, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation15(self, dtype, xp):
- data = np.zeros([5], dtype=dtype)
- data[1] = 1
- data = xp.asarray(data)
- struct = xp.asarray([1, 0, 1])
- out = ndimage.binary_dilation(data, struct,
- origin=-1, border_value=1)
- assert_array_almost_equal(out, xp.asarray([1, 1, 0, 1, 0]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation16(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 1], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([[1]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation17(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.zeros([1, 1], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([[0]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation18(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([1, 3], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([[1, 1, 1]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation19(self, dtype, xp):
- dtype = getattr(xp, dtype)
- data = xp.ones([3, 3], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([[1, 1, 1],
- [1, 1, 1],
- [1, 1, 1]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation20(self, dtype, xp):
- data = np.zeros([3, 3], dtype=dtype)
- data[1, 1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, xp.asarray([[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation21(self, dtype, xp):
- struct = ndimage.generate_binary_structure(2, 2)
- struct = xp.asarray(struct)
- data = np.zeros([3, 3], dtype=dtype)
- data[1, 1] = 1
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, struct)
- assert_array_almost_equal(out, xp.asarray([[1, 1, 1],
- [1, 1, 1],
- [1, 1, 1]]))
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation22(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[0, 1, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation23(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[1, 1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 0, 0, 0, 0, 1],
- [1, 1, 0, 0, 0, 1, 0, 1],
- [1, 0, 0, 1, 1, 1, 1, 1],
- [1, 0, 1, 1, 1, 1, 0, 1],
- [1, 1, 1, 1, 1, 1, 1, 1],
- [1, 0, 1, 0, 0, 1, 0, 1],
- [1, 1, 1, 1, 1, 1, 1, 1]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, border_value=1)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation24(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[1, 1, 0, 0, 0, 0, 0, 0],
- [1, 0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 0, 0],
- [0, 1, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, origin=(1, 1))
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation25(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[1, 1, 0, 0, 0, 0, 1, 1],
- [1, 0, 0, 0, 1, 0, 1, 1],
- [0, 0, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 0, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1],
- [0, 1, 0, 0, 1, 0, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, origin=(1, 1), border_value=1)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation26(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = ndimage.generate_binary_structure(2, 2)
- expected = [[1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, struct)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation27(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = [[0, 1],
- [1, 1]]
- expected = [[0, 1, 0, 0, 0, 0, 0, 0],
- [1, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 0, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, struct)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation28(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[1, 1, 1, 1],
- [1, 0, 0, 1],
- [1, 0, 0, 1],
- [1, 1, 1, 1]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0],
- [0, 0, 0, 0],
- [0, 0, 0, 0],
- [0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, border_value=1)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation29(self, xp):
- struct = [[0, 1],
- [1, 1]]
- expected = [[0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 1, 1, 0],
- [0, 1, 1, 1, 0],
- [0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, struct, iterations=2)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='output= arrays are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation30(self, xp):
- struct = [[0, 1],
- [1, 1]]
- expected = [[0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 1, 1, 0],
- [0, 1, 1, 1, 0],
- [0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_dilation(data, struct, iterations=2, output=out)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation31(self, xp):
- struct = [[0, 1],
- [1, 1]]
- expected = [[0, 0, 0, 1, 0],
- [0, 0, 1, 1, 0],
- [0, 1, 1, 1, 0],
- [1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, struct, iterations=3)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='output= arrays are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation32(self, xp):
- struct = [[0, 1],
- [1, 1]]
- expected = [[0, 0, 0, 1, 0],
- [0, 0, 1, 1, 0],
- [0, 1, 1, 1, 0],
- [1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = np.zeros(data.shape, dtype=bool)
- out = xp.asarray(out)
- ndimage.binary_dilation(data, struct, iterations=3, output=out)
- assert_array_almost_equal(out, expected)
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation33(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 1, 1, 0, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- mask = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 1, 0],
- [0, 0, 0, 0, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 1, 1, 0, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- mask = xp.asarray(mask)
- data = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, struct, iterations=-1,
- mask=mask, border_value=0)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason='inplace output= arrays are numpy-specific')
- @xfail_xp_backends("cupy",
- reason="NotImplementedError: only brute_force iteration")
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation34(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- mask = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- mask = xp.asarray(mask)
- data = np.zeros(mask.shape, dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, struct, iterations=-1,
- mask=mask, border_value=1)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation35(self, dtype, xp):
- dtype = getattr(xp, dtype)
- tmp = [[1, 1, 0, 0, 0, 0, 1, 1],
- [1, 0, 0, 0, 1, 0, 1, 1],
- [0, 0, 1, 1, 1, 1, 1, 1],
- [0, 1, 1, 1, 1, 0, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1],
- [0, 1, 0, 0, 1, 0, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1],
- [1, 1, 1, 1, 1, 1, 1, 1]]
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]])
- mask = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- mask = np.asarray(mask, dtype=bool)
- expected = np.logical_and(tmp, mask)
- tmp = np.logical_and(data, np.logical_not(mask))
- expected = np.logical_or(expected, tmp)
- mask = xp.asarray(mask)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_dilation(data, mask=mask,
- origin=(1, 1), border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation36(self, xp):
- # gh-21009
- data = np.zeros([], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_dilation(data, iterations=-1)
- assert out == xp.asarray(False)
- @make_xp_test_case(ndimage.binary_propagation)
- def test_binary_propagation01(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 1, 1, 0, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- mask = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 1, 0],
- [0, 0, 0, 0, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 0, 0, 0],
- [0, 1, 1, 0, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- mask = xp.asarray(mask)
- data = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_propagation(data, struct,
- mask=mask, border_value=0)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_propagation)
- def test_binary_propagation02(self, xp):
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- expected = [[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- struct = xp.asarray(struct)
- mask = np.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- mask = xp.asarray(mask)
- data = np.zeros(mask.shape, dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_propagation(data, struct,
- mask=mask, border_value=1)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_propagation)
- def test_binary_propagation03(self, xp):
- # gh-21009
- data = xp.asarray(np.zeros([], dtype=bool))
- expected = xp.asarray(np.zeros([], dtype=bool))
- out = ndimage.binary_propagation(data)
- assert out == expected
- @make_xp_test_case(ndimage.binary_opening)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_opening01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[0, 1, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 0, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_opening(data)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_opening)
- @pytest.mark.parametrize('dtype', types)
- def test_binary_opening02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = ndimage.generate_binary_structure(2, 2)
- expected = [[1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- struct = xp.asarray(struct)
- data = xp.asarray([[1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 0, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_opening(data, struct)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_closing)
- def test_binary_closing01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 1, 0, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 0, 1, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_closing(data)
- assert_array_almost_equal(out, expected)
- @pytest.mark.parametrize('dtype', types)
- @make_xp_test_case(ndimage.binary_closing)
- def test_binary_closing02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = ndimage.generate_binary_structure(2, 2)
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- struct = xp.asarray(struct)
- data = xp.asarray([[1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [1, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 0, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_closing(data, struct)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_fill_holes)
- def test_binary_fill_holes01(self, xp):
- expected = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_fill_holes(data)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_fill_holes)
- def test_binary_fill_holes02(self, xp):
- expected = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 1, 1, 1, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 1, 0, 0, 1, 0, 0],
- [0, 0, 0, 1, 1, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_fill_holes(data)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_fill_holes)
- def test_binary_fill_holes03(self, xp):
- expected = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 0, 1, 1, 1],
- [0, 1, 1, 1, 0, 1, 1, 1],
- [0, 1, 1, 1, 0, 1, 1, 1],
- [0, 0, 1, 0, 0, 1, 1, 1],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- expected = xp.asarray(expected)
- data = np.asarray([[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 1, 0, 1, 1, 1],
- [0, 1, 0, 1, 0, 1, 0, 1],
- [0, 1, 0, 1, 0, 1, 0, 1],
- [0, 0, 1, 0, 0, 1, 1, 1],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=bool)
- data = xp.asarray(data)
- out = ndimage.binary_fill_holes(data)
- assert_array_almost_equal(out, expected)
- @skip_xp_backends(cpu_only=True)
- @skip_xp_backends(
- "cupy", reason="these filters do not yet have axes support in CuPy")
- @skip_xp_backends(
- "jax.numpy", reason="these filters are not implemented in JAX.numpy")
- @pytest.mark.parametrize('border_value',[0, 1])
- @pytest.mark.parametrize('origin', [(0, 0), (-1, 0)])
- @pytest.mark.parametrize('expand_axis', [0, 1, 2])
- @pytest.mark.parametrize(
- 'func', [
- make_xp_pytest_param(ndimage.binary_erosion),
- make_xp_pytest_param(ndimage.binary_dilation),
- make_xp_pytest_param(ndimage.binary_opening),
- make_xp_pytest_param(ndimage.binary_closing),
- make_xp_pytest_param(ndimage.binary_hit_or_miss),
- make_xp_pytest_param(ndimage.binary_propagation),
- make_xp_pytest_param(ndimage.binary_fill_holes),
- ]
- )
- def test_binary_axes(self, xp, func, expand_axis, origin, border_value):
- func_name = func.__name__
- struct = np.asarray([[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]], bool)
- struct = xp.asarray(struct)
- data = np.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0],
- [0, 0, 1, 1, 0, 1, 0],
- [0, 1, 0, 1, 1, 0, 1],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 0, 0, 0],
- [0, 0, 0, 1, 0, 0, 0]], bool)
- data = xp.asarray(data)
- if func_name == "binary_hit_or_miss":
- kwargs = dict(origin1=origin, origin2=origin)
- else:
- kwargs = dict(origin=origin)
- border_supported = func_name not in ["binary_hit_or_miss",
- "binary_fill_holes"]
- if border_supported:
- kwargs['border_value'] = border_value
- elif border_value != 0:
- pytest.skip('border_value !=0 unsupported by this function')
- expected = func(data, struct, **kwargs)
- # replicate data and expected result along a new axis
- n_reps = 5
- expected = xp.stack([expected] * n_reps, axis=expand_axis)
- data = xp.stack([data] * n_reps, axis=expand_axis)
- # filter all axes except expand_axis
- axes = [0, 1, 2]
- axes.remove(expand_axis)
- if is_numpy(xp) or is_cupy(xp):
- out = xp.asarray(np.zeros(data.shape, bool))
- func(data, struct, output=out, axes=axes, **kwargs)
- else:
- # inplace output= is unsupported by JAX
- out = func(data, struct, axes=axes, **kwargs)
- xp_assert_close(out, expected)
- @make_xp_test_case(ndimage.grey_erosion)
- def test_grey_erosion01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- output = ndimage.grey_erosion(array, footprint=footprint)
- assert_array_almost_equal(output,
- xp.asarray([[2, 2, 1, 1, 1],
- [2, 3, 1, 3, 1],
- [5, 5, 3, 3, 1]]))
- @skip_xp_backends("jax.numpy", reason="output=array requires buffer view")
- @skip_xp_backends("dask.array", reason="output=array requires buffer view")
- @xfail_xp_backends("cupy", reason="https://github.com/cupy/cupy/issues/8398")
- @make_xp_test_case(ndimage.grey_erosion)
- def test_grey_erosion01_overlap(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- ndimage.grey_erosion(array, footprint=footprint, output=array)
- assert_array_almost_equal(array,
- xp.asarray([[2, 2, 1, 1, 1],
- [2, 3, 1, 3, 1],
- [5, 5, 3, 3, 1]])
- )
- @make_xp_test_case(ndimage.grey_erosion)
- def test_grey_erosion02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- output = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output,
- xp.asarray([[2, 2, 1, 1, 1],
- [2, 3, 1, 3, 1],
- [5, 5, 3, 3, 1]])
- )
- @make_xp_test_case(ndimage.grey_erosion)
- def test_grey_erosion03(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[1, 1, 1], [1, 1, 1]])
- output = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output,
- xp.asarray([[1, 1, 0, 0, 0],
- [1, 2, 0, 2, 0],
- [4, 4, 2, 2, 0]])
- )
- @make_xp_test_case(ndimage.grey_dilation)
- def test_grey_dilation01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[0, 1, 1], [1, 0, 1]])
- output = ndimage.grey_dilation(array, footprint=footprint)
- assert_array_almost_equal(output,
- xp.asarray([[7, 7, 9, 9, 5],
- [7, 9, 8, 9, 7],
- [8, 8, 8, 7, 7]]),
- )
- @make_xp_test_case(ndimage.grey_dilation)
- def test_grey_dilation02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[0, 1, 1], [1, 0, 1]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- output = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output,
- xp.asarray([[7, 7, 9, 9, 5],
- [7, 9, 8, 9, 7],
- [8, 8, 8, 7, 7]]),
- )
- @make_xp_test_case(ndimage.grey_dilation)
- def test_grey_dilation03(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[0, 1, 1], [1, 0, 1]])
- structure = xp.asarray([[1, 1, 1], [1, 1, 1]])
- output = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output,
- xp.asarray([[8, 8, 10, 10, 6],
- [8, 10, 9, 10, 8],
- [9, 9, 9, 8, 8]]),
- )
- @make_xp_test_case(ndimage.grey_opening)
- def test_grey_opening01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- tmp = ndimage.grey_erosion(array, footprint=footprint)
- expected = ndimage.grey_dilation(tmp, footprint=footprint)
- output = ndimage.grey_opening(array, footprint=footprint)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_opening)
- def test_grey_opening02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- expected = ndimage.grey_dilation(tmp, footprint=footprint,
- structure=structure)
- output = ndimage.grey_opening(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_closing)
- def test_grey_closing01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- tmp = ndimage.grey_dilation(array, footprint=footprint)
- expected = ndimage.grey_erosion(tmp, footprint=footprint)
- output = ndimage.grey_closing(array, footprint=footprint)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_closing)
- def test_grey_closing02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- expected = ndimage.grey_erosion(tmp, footprint=footprint,
- structure=structure)
- output = ndimage.grey_closing(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @skip_xp_backends(np_only=True, reason='output= arrays are numpy-specific')
- @make_xp_test_case(ndimage.grey_dilation, ndimage.grey_erosion,
- ndimage.morphological_gradient)
- def test_morphological_gradient01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp1 = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- tmp2 = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- expected = tmp1 - tmp2
- output = xp.zeros(array.shape, dtype=array.dtype)
- ndimage.morphological_gradient(array, footprint=footprint,
- structure=structure, output=output)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_dilation, ndimage.grey_erosion,
- ndimage.morphological_gradient)
- def test_morphological_gradient02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp1 = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- tmp2 = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- expected = tmp1 - tmp2
- output = ndimage.morphological_gradient(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @skip_xp_backends(np_only=True, reason='output= arrays are numpy-specific')
- @make_xp_test_case(ndimage.grey_dilation, ndimage.grey_erosion,
- ndimage.morphological_laplace)
- def test_morphological_laplace01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp1 = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- tmp2 = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- expected = tmp1 + tmp2 - 2 * array
- output = xp.zeros(array.shape, dtype=array.dtype)
- ndimage.morphological_laplace(array, footprint=footprint,
- structure=structure, output=output)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_dilation, ndimage.grey_erosion,
- ndimage.morphological_laplace)
- def test_morphological_laplace02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp1 = ndimage.grey_dilation(array, footprint=footprint,
- structure=structure)
- tmp2 = ndimage.grey_erosion(array, footprint=footprint,
- structure=structure)
- expected = tmp1 + tmp2 - 2 * array
- output = ndimage.morphological_laplace(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @skip_xp_backends("jax.numpy", reason="output=array requires buffer view")
- @skip_xp_backends("dask.array", reason="output=array requires buffer view")
- @make_xp_test_case(ndimage.grey_opening, ndimage.white_tophat)
- def test_white_tophat01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_opening(array, footprint=footprint,
- structure=structure)
- expected = array - tmp
- output = xp.zeros(array.shape, dtype=array.dtype)
- ndimage.white_tophat(array, footprint=footprint,
- structure=structure, output=output)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_opening, ndimage.white_tophat)
- def test_white_tophat02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_opening(array, footprint=footprint,
- structure=structure)
- expected = array - tmp
- output = ndimage.white_tophat(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @xfail_xp_backends('cupy', reason="cupy#8399")
- @make_xp_test_case(ndimage.white_tophat)
- def test_white_tophat03(self, xp):
- array = np.asarray([[1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 0, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 1]], dtype=bool)
- array = xp.asarray(array)
- structure = np.ones((3, 3), dtype=bool)
- structure = xp.asarray(structure)
- expected = np.asarray([[0, 1, 1, 0, 0, 0, 0],
- [1, 0, 0, 1, 1, 1, 0],
- [1, 0, 0, 1, 1, 1, 0],
- [0, 1, 1, 0, 0, 0, 1],
- [0, 1, 1, 0, 1, 0, 1],
- [0, 1, 1, 0, 0, 0, 1],
- [0, 0, 0, 1, 1, 1, 1]], dtype=bool)
- expected = xp.asarray(expected)
- output = ndimage.white_tophat(array, structure=structure)
- xp_assert_equal(output, expected)
- @skip_xp_backends("jax.numpy", reason="output=array requires buffer view")
- @skip_xp_backends("dask.array", reason="output=array requires buffer view")
- @make_xp_test_case(ndimage.white_tophat)
- def test_white_tophat04(self, xp):
- array = np.eye(5, dtype=bool)
- structure = np.ones((3, 3), dtype=bool)
- array = xp.asarray(array)
- structure = xp.asarray(structure)
- # Check that type mismatch is properly handled
- output = xp.empty_like(array, dtype=xp.float64)
- ndimage.white_tophat(array, structure=structure, output=output)
- @skip_xp_backends("jax.numpy", reason="output=array requires buffer view")
- @skip_xp_backends("dask.array", reason="output=array requires buffer view")
- @make_xp_test_case(ndimage.grey_closing, ndimage.black_tophat)
- def test_black_tophat01(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_closing(array, footprint=footprint,
- structure=structure)
- expected = tmp - array
- output = xp.zeros(array.shape, dtype=array.dtype)
- ndimage.black_tophat(array, footprint=footprint,
- structure=structure, output=output)
- assert_array_almost_equal(output, expected)
- @make_xp_test_case(ndimage.grey_closing, ndimage.black_tophat)
- def test_black_tophat02(self, xp):
- array = xp.asarray([[3, 2, 5, 1, 4],
- [7, 6, 9, 3, 5],
- [5, 8, 3, 7, 1]])
- footprint = xp.asarray([[1, 0, 1], [1, 1, 0]])
- structure = xp.asarray([[0, 0, 0], [0, 0, 0]])
- tmp = ndimage.grey_closing(array, footprint=footprint,
- structure=structure)
- expected = tmp - array
- output = ndimage.black_tophat(array, footprint=footprint,
- structure=structure)
- assert_array_almost_equal(output, expected)
- @xfail_xp_backends('cupy', reason="cupy/cupy#8399")
- @make_xp_test_case(ndimage.black_tophat)
- def test_black_tophat03(self, xp):
- array = np.asarray([[1, 0, 0, 0, 0, 0, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 0, 1, 0],
- [0, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 1]], dtype=bool)
- array = xp.asarray(array)
- structure = np.ones((3, 3), dtype=bool)
- structure = xp.asarray(structure)
- expected = np.asarray([[0, 1, 1, 1, 1, 1, 1],
- [1, 0, 0, 0, 0, 0, 1],
- [1, 0, 0, 0, 0, 0, 1],
- [1, 0, 0, 0, 0, 0, 1],
- [1, 0, 0, 0, 1, 0, 1],
- [1, 0, 0, 0, 0, 0, 1],
- [1, 1, 1, 1, 1, 1, 0]], dtype=bool)
- expected = xp.asarray(expected)
- output = ndimage.black_tophat(array, structure=structure)
- xp_assert_equal(output, expected)
- @skip_xp_backends("jax.numpy", reason="output=array requires buffer view")
- @skip_xp_backends("dask.array", reason="output=array requires buffer view")
- @make_xp_test_case(ndimage.black_tophat)
- def test_black_tophat04(self, xp):
- array = xp.asarray(np.eye(5, dtype=bool))
- structure = xp.asarray(np.ones((3, 3), dtype=bool))
- # Check that type mismatch is properly handled
- output = xp.empty_like(array, dtype=xp.float64)
- ndimage.black_tophat(array, structure=structure, output=output)
- @skip_xp_backends(cpu_only=True)
- @skip_xp_backends(
- "cupy", reason="these filters do not yet have axes support in CuPy")
- @skip_xp_backends(
- "jax.numpy", reason="these filters are not implemented in JAX.numpy")
- @pytest.mark.parametrize('origin', [(0, 0), (-1, 0)])
- @pytest.mark.parametrize('expand_axis', [0, 1, 2])
- @pytest.mark.parametrize('mode', ['reflect', 'constant', 'nearest',
- 'mirror', 'wrap'])
- @pytest.mark.parametrize('footprint_mode', ['size', 'footprint',
- 'structure'])
- @pytest.mark.parametrize(
- 'func',
- [
- make_xp_pytest_param(ndimage.grey_erosion),
- make_xp_pytest_param(ndimage.grey_dilation),
- make_xp_pytest_param(ndimage.grey_opening),
- make_xp_pytest_param(ndimage.grey_closing),
- make_xp_pytest_param(ndimage.morphological_laplace),
- make_xp_pytest_param(ndimage.morphological_gradient),
- make_xp_pytest_param(ndimage.white_tophat),
- make_xp_pytest_param(ndimage.black_tophat),
- ]
- )
- def test_grey_axes(self, xp, func, expand_axis, origin, footprint_mode,
- mode):
- data = xp.asarray([[0, 0, 0, 1, 0, 0, 0],
- [0, 0, 0, 4, 0, 0, 0],
- [0, 0, 2, 1, 0, 2, 0],
- [0, 3, 0, 6, 5, 0, 1],
- [0, 4, 5, 3, 3, 4, 0],
- [0, 0, 9, 3, 0, 0, 0],
- [0, 0, 0, 2, 0, 0, 0]])
- kwargs = dict(origin=origin, mode=mode)
- if footprint_mode == 'size':
- kwargs['size'] = (2, 3)
- else:
- kwargs['footprint'] = xp.asarray([[1, 0, 1], [1, 1, 0]])
- if footprint_mode == 'structure':
- kwargs['structure'] = xp.ones_like(kwargs['footprint'])
- expected = func(data, **kwargs)
- # replicate data and expected result along a new axis
- n_reps = 5
- expected = xp.stack([expected] * n_reps, axis=expand_axis)
- data = xp.stack([data] * n_reps, axis=expand_axis)
- # filter all axes except expand_axis
- axes = [0, 1, 2]
- axes.remove(expand_axis)
- if is_numpy(xp) or is_cupy(xp):
- out = xp.zeros(expected.shape, dtype=expected.dtype)
- func(data, output=out, axes=axes, **kwargs)
- else:
- # inplace output= is unsupported by JAX
- out = func(data, axes=axes, **kwargs)
- xp_assert_close(out, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason="inplace output= is numpy-specific")
- @make_xp_test_case(ndimage.binary_hit_or_miss)
- @pytest.mark.parametrize('dtype', types)
- def test_hit_or_miss01(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- struct = xp.asarray(struct)
- expected = [[0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0]]
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 1, 0, 0, 0],
- [1, 1, 1, 0, 0],
- [0, 1, 0, 1, 1],
- [0, 0, 1, 1, 1],
- [0, 1, 1, 1, 0],
- [0, 1, 1, 1, 1],
- [0, 1, 1, 1, 1],
- [0, 0, 0, 0, 0]], dtype=dtype)
- out = xp.asarray(np.zeros(data.shape, dtype=bool))
- ndimage.binary_hit_or_miss(data, struct, output=out)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_hit_or_miss)
- @pytest.mark.parametrize('dtype', types)
- def test_hit_or_miss02(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct = [[0, 1, 0],
- [1, 1, 1],
- [0, 1, 0]]
- expected = [[0, 0, 0, 0, 0, 0, 0, 0],
- [0, 1, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- struct = xp.asarray(struct)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 1, 0, 0, 1, 1, 1, 0],
- [1, 1, 1, 0, 0, 1, 0, 0],
- [0, 1, 0, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_hit_or_miss(data, struct)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_hit_or_miss)
- @pytest.mark.parametrize('dtype', types)
- def test_hit_or_miss03(self, dtype, xp):
- dtype = getattr(xp, dtype)
- struct1 = [[0, 0, 0],
- [1, 1, 1],
- [0, 0, 0]]
- struct2 = [[1, 1, 1],
- [0, 0, 0],
- [1, 1, 1]]
- expected = [[0, 0, 0, 0, 0, 1, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0],
- [0, 0, 1, 0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]]
- struct1 = xp.asarray(struct1)
- struct2 = xp.asarray(struct2)
- expected = xp.asarray(expected)
- data = xp.asarray([[0, 1, 0, 0, 1, 1, 1, 0],
- [1, 1, 1, 0, 0, 0, 0, 0],
- [0, 1, 0, 1, 1, 1, 1, 0],
- [0, 0, 1, 1, 1, 1, 1, 0],
- [0, 1, 1, 1, 0, 1, 1, 0],
- [0, 0, 0, 0, 1, 1, 1, 0],
- [0, 1, 1, 1, 1, 1, 1, 0],
- [0, 0, 0, 0, 0, 0, 0, 0]], dtype=dtype)
- out = ndimage.binary_hit_or_miss(data, struct1, struct2)
- assert_array_almost_equal(out, expected)
- @make_xp_test_case(ndimage.binary_dilation, ndimage.grey_dilation)
- class TestDilateFix:
- # pytest's setup_method seems to clash with the autouse `xp` fixture
- # so call _setup manually from all methods
- def _setup(self, xp):
- # dilation related setup
- self.array = xp.asarray([[0, 0, 0, 0, 0],
- [0, 0, 0, 0, 0],
- [0, 0, 0, 1, 0],
- [0, 0, 1, 1, 0],
- [0, 0, 0, 0, 0]], dtype=xp.uint8)
- self.sq3x3 = xp.ones((3, 3))
- dilated3x3 = ndimage.binary_dilation(self.array, structure=self.sq3x3)
- if is_numpy(xp):
- self.dilated3x3 = dilated3x3.view(xp.uint8)
- else:
- self.dilated3x3 = xp.astype(dilated3x3, xp.uint8)
- def test_dilation_square_structure(self, xp):
- self._setup(xp)
- result = ndimage.grey_dilation(self.array, structure=self.sq3x3)
- # +1 accounts for difference between grey and binary dilation
- assert_array_almost_equal(result, self.dilated3x3 + 1)
- def test_dilation_scalar_size(self, xp):
- self._setup(xp)
- result = ndimage.grey_dilation(self.array, size=3)
- assert_array_almost_equal(result, self.dilated3x3)
- @make_xp_test_case(ndimage.binary_opening, ndimage.binary_closing)
- class TestBinaryOpeningClosing:
- def _setup(self, xp):
- a = np.zeros((5, 5), dtype=bool)
- a[1:4, 1:4] = True
- a[4, 4] = True
- self.array = xp.asarray(a)
- self.sq3x3 = xp.ones((3, 3))
- self.opened_old = ndimage.binary_opening(self.array, self.sq3x3,
- 1, None, 0)
- self.closed_old = ndimage.binary_closing(self.array, self.sq3x3,
- 1, None, 0)
- def test_opening_new_arguments(self, xp):
- self._setup(xp)
- opened_new = ndimage.binary_opening(self.array, self.sq3x3, 1, None,
- 0, None, 0, False)
- xp_assert_equal(opened_new, self.opened_old)
- def test_closing_new_arguments(self, xp):
- self._setup(xp)
- closed_new = ndimage.binary_closing(self.array, self.sq3x3, 1, None,
- 0, None, 0, False)
- xp_assert_equal(closed_new, self.closed_old)
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_erosion_noninteger_iterations(xp):
- # regression test for gh-9905, gh-9909: ValueError for
- # non integer iterations
- data = xp.ones([1])
- assert_raises(TypeError, ndimage.binary_erosion, data, iterations=0.5)
- assert_raises(TypeError, ndimage.binary_erosion, data, iterations=1.5)
- @make_xp_test_case(ndimage.binary_dilation)
- def test_binary_dilation_noninteger_iterations(xp):
- # regression test for gh-9905, gh-9909: ValueError for
- # non integer iterations
- data = xp.ones([1])
- assert_raises(TypeError, ndimage.binary_dilation, data, iterations=0.5)
- assert_raises(TypeError, ndimage.binary_dilation, data, iterations=1.5)
- @make_xp_test_case(ndimage.binary_opening)
- def test_binary_opening_noninteger_iterations(xp):
- # regression test for gh-9905, gh-9909: ValueError for
- # non integer iterations
- data = xp.ones([1])
- assert_raises(TypeError, ndimage.binary_opening, data, iterations=0.5)
- assert_raises(TypeError, ndimage.binary_opening, data, iterations=1.5)
- @make_xp_test_case(ndimage.binary_closing)
- def test_binary_closing_noninteger_iterations(xp):
- # regression test for gh-9905, gh-9909: ValueError for
- # non integer iterations
- data = xp.ones([1])
- assert_raises(TypeError, ndimage.binary_closing, data, iterations=0.5)
- assert_raises(TypeError, ndimage.binary_closing, data, iterations=1.5)
- @xfail_xp_backends(
- "cupy", reason="CuPy: NotImplementedError: only brute_force iteration"
- )
- @make_xp_test_case(ndimage.binary_erosion)
- def test_binary_closing_noninteger_brute_force_passes_when_true(xp):
- # regression test for gh-9905, gh-9909: ValueError for non integer iterations
- data = xp.ones([1])
- xp_assert_equal(ndimage.binary_erosion(data, iterations=2, brute_force=1.5),
- ndimage.binary_erosion(data, iterations=2, brute_force=bool(1.5))
- )
- xp_assert_equal(ndimage.binary_erosion(data, iterations=2, brute_force=0.0),
- ndimage.binary_erosion(data, iterations=2, brute_force=bool(0.0))
- )
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason="inplace output= is numpy-specific")
- @xfail_xp_backends("cupy", reason="NotImplementedError: only brute_force iteration")
- @pytest.mark.parametrize(
- 'func',
- [
- make_xp_pytest_param(ndimage.binary_erosion),
- make_xp_pytest_param(ndimage.binary_dilation),
- make_xp_pytest_param(ndimage.binary_opening),
- make_xp_pytest_param(ndimage.binary_closing),
- ],
- )
- @pytest.mark.parametrize('iterations', [1, 5])
- @pytest.mark.parametrize('brute_force', [False, True])
- def test_binary_input_as_output(func, iterations, brute_force, xp):
- rstate = np.random.RandomState(123)
- data = rstate.randint(low=0, high=2, size=100).astype(bool)
- data = xp.asarray(data)
- # input data is not modified
- data_orig = data.copy()
- expected = func(data, brute_force=brute_force, iterations=iterations)
- xp_assert_equal(data, data_orig)
- # data should now contain the expected result
- func(data, brute_force=brute_force, iterations=iterations, output=data)
- xp_assert_equal(data, expected)
- @skip_xp_backends(np_only=True, exceptions=["cupy"],
- reason="inplace output= is numpy-specific")
- @make_xp_test_case(ndimage.binary_hit_or_miss)
- def test_binary_hit_or_miss_input_as_output(xp):
- rstate = np.random.RandomState(123)
- data = rstate.randint(low=0, high=2, size=100).astype(bool)
- data = xp.asarray(data)
- # input data is not modified
- data_orig = data.copy()
- expected = ndimage.binary_hit_or_miss(data)
- xp_assert_equal(data, data_orig)
- # data should now contain the expected result
- ndimage.binary_hit_or_miss(data, output=data)
- xp_assert_equal(data, expected)
- @make_xp_test_case(ndimage.distance_transform_cdt)
- def test_distance_transform_cdt_invalid_metric(xp):
- msg = 'invalid metric provided'
- with pytest.raises(ValueError, match=msg):
- ndimage.distance_transform_cdt(xp.ones((5, 5)),
- metric="garbage")
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