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- import numpy as np
- import pytest
- import shapely
- from shapely import Geometry, GeometryCollection, Polygon
- from shapely.testing import assert_geometries_equal
- from shapely.tests.common import all_types, empty, ignore_invalid, point, polygon
- pytestmark = pytest.mark.filterwarnings(
- "ignore:The symmetric_difference_all function:DeprecationWarning"
- )
- # fixed-precision operations raise GEOS exceptions on mixed dimension geometry
- # collections
- all_single_types = np.array(all_types)[
- ~shapely.is_empty(all_types)
- & (shapely.get_type_id(all_types) != shapely.GeometryType.GEOMETRYCOLLECTION)
- ]
- SET_OPERATIONS = (
- shapely.difference,
- shapely.intersection,
- shapely.symmetric_difference,
- shapely.union,
- # shapely.coverage_union is tested separately
- )
- REDUCE_SET_OPERATIONS = (
- (shapely.intersection_all, shapely.intersection),
- (shapely.symmetric_difference_all, shapely.symmetric_difference),
- (shapely.union_all, shapely.union),
- # shapely.coverage_union_all, shapely.coverage_union) is tested separately
- )
- # operations that support fixed precision
- REDUCE_SET_OPERATIONS_PREC = ((shapely.union_all, shapely.union),)
- if shapely.geos_version >= (3, 12, 0):
- SET_OPERATIONS += (shapely.disjoint_subset_union,)
- REDUCE_SET_OPERATIONS += (
- (shapely.disjoint_subset_union_all, shapely.disjoint_subset_union),
- )
- reduce_test_data = [
- shapely.box(0, 0, 5, 5),
- shapely.box(2, 2, 7, 7),
- shapely.box(4, 4, 9, 9),
- shapely.box(5, 5, 10, 10),
- ]
- non_polygon_types = np.array(all_types)[
- ~shapely.is_empty(all_types) & (shapely.get_dimensions(all_types) != 2)
- ]
- @pytest.mark.parametrize("a", all_types)
- @pytest.mark.parametrize("func", SET_OPERATIONS)
- def test_set_operation_array(a, func):
- if (
- func is shapely.difference
- and a.geom_type == "GeometryCollection"
- and shapely.get_num_geometries(a) == 2
- and shapely.geos_version == (3, 9, 5)
- ):
- pytest.xfail("GEOS 3.9.5 crashes with mixed collection")
- actual = func(a, point)
- assert isinstance(actual, Geometry)
- actual = func([a, a], point)
- assert actual.shape == (2,)
- assert isinstance(actual[0], Geometry)
- @pytest.mark.parametrize("func", SET_OPERATIONS)
- def test_set_operation_prec_nonscalar_grid_size(func):
- if func is shapely.disjoint_subset_union:
- pytest.skip("disjoint_subset_union does not support grid_size")
- with pytest.raises(
- ValueError, match="grid_size parameter only accepts scalar values"
- ):
- func(point, point, grid_size=[1])
- @pytest.mark.parametrize("a", all_single_types)
- @pytest.mark.parametrize("func", SET_OPERATIONS)
- @pytest.mark.parametrize("grid_size", [0, 1, 2])
- def test_set_operation_prec_array(a, func, grid_size):
- if func is shapely.disjoint_subset_union:
- pytest.skip("disjoint_subset_union does not support grid_size")
- actual = func([a, a], point, grid_size=grid_size)
- assert actual.shape == (2,)
- assert isinstance(actual[0], Geometry)
- # results should match the operation when the precision is previously set
- # to same grid_size
- b = shapely.set_precision(a, grid_size=grid_size)
- point2 = shapely.set_precision(point, grid_size=grid_size)
- expected = func([b, b], point2)
- assert shapely.equals(shapely.normalize(actual), shapely.normalize(expected)).all()
- @pytest.mark.parametrize("n", range(1, 5))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_1dim(n, func, related_func):
- actual = func(reduce_test_data[:n])
- # perform the reduction in a python loop and compare
- expected = reduce_test_data[0]
- for i in range(1, n):
- expected = related_func(expected, reduce_test_data[i])
- assert shapely.equals(actual, expected)
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_single_geom(func, related_func):
- geom = shapely.Point(1, 1)
- actual = func([geom, None, None])
- assert shapely.equals(actual, geom)
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_axis(func, related_func):
- data = [[point] * 2] * 3 # shape = (3, 2)
- actual = func(data, axis=None) # default
- assert isinstance(actual, Geometry) # scalar output
- actual = func(data, axis=0)
- assert actual.shape == (2,)
- actual = func(data, axis=1)
- assert actual.shape == (3,)
- actual = func(data, axis=-1)
- assert actual.shape == (3,)
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_empty(func, related_func):
- assert func(np.empty((0,), dtype=object)) == empty
- arr_empty_2D = np.empty((0, 2), dtype=object)
- assert func(arr_empty_2D) == empty
- assert func(arr_empty_2D, axis=0).tolist() == [empty] * 2
- assert func(arr_empty_2D, axis=1).tolist() == []
- @pytest.mark.parametrize("none_position", range(3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_one_none(func, related_func, none_position):
- # API change: before, intersection_all and symmetric_difference_all returned
- # None if any input geometry was None.
- # The new behaviour is to ignore None values.
- test_data = reduce_test_data[:2]
- test_data.insert(none_position, None)
- actual = func(test_data)
- expected = related_func(reduce_test_data[0], reduce_test_data[1])
- assert_geometries_equal(actual, expected)
- @pytest.mark.parametrize("none_position", range(3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_two_none(func, related_func, none_position):
- test_data = reduce_test_data[:2]
- test_data.insert(none_position, None)
- test_data.insert(none_position, None)
- actual = func(test_data)
- expected = related_func(reduce_test_data[0], reduce_test_data[1])
- assert_geometries_equal(actual, expected)
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_some_none_len2(func, related_func):
- # in a previous implementation, this would take a different code path
- # and return wrong result
- assert func([empty, None]) == empty
- @pytest.mark.parametrize("n", range(1, 3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_all_none(n, func, related_func):
- assert_geometries_equal(func([None] * n), GeometryCollection([]))
- @pytest.mark.parametrize("n", range(1, 3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS)
- def test_set_operation_reduce_all_none_arr(n, func, related_func):
- assert func([[None] * n] * 2, axis=1).tolist() == [empty, empty]
- assert func([[None] * 2] * n, axis=0).tolist() == [empty, empty]
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_nonscalar_grid_size(func, related_func):
- with pytest.raises(
- ValueError, match="grid_size parameter only accepts scalar values"
- ):
- func([point, point], grid_size=[1])
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_grid_size_nan(func, related_func):
- actual = func([point, point], grid_size=np.nan)
- assert actual is None
- @pytest.mark.parametrize("n", range(1, 5))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- @pytest.mark.parametrize("grid_size", [0, 1])
- def test_set_operation_prec_reduce_1dim(n, func, related_func, grid_size):
- actual = func(reduce_test_data[:n], grid_size=grid_size)
- # perform the reduction in a python loop and compare
- expected = reduce_test_data[0]
- for i in range(1, n):
- expected = related_func(expected, reduce_test_data[i], grid_size=grid_size)
- assert shapely.equals(actual, expected)
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_axis(func, related_func):
- data = [[point] * 2] * 3 # shape = (3, 2)
- actual = func(data, grid_size=1, axis=None) # default
- assert isinstance(actual, Geometry) # scalar output
- actual = func(data, grid_size=1, axis=0)
- assert actual.shape == (2,)
- actual = func(data, grid_size=1, axis=1)
- assert actual.shape == (3,)
- actual = func(data, grid_size=1, axis=-1)
- assert actual.shape == (3,)
- @pytest.mark.parametrize("none_position", range(3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_one_none(func, related_func, none_position):
- test_data = reduce_test_data[:2]
- test_data.insert(none_position, None)
- actual = func(test_data, grid_size=1)
- expected = related_func(reduce_test_data[0], reduce_test_data[1], grid_size=1)
- assert_geometries_equal(actual, expected)
- @pytest.mark.parametrize("none_position", range(3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_two_none(func, related_func, none_position):
- test_data = reduce_test_data[:2]
- test_data.insert(none_position, None)
- test_data.insert(none_position, None)
- actual = func(test_data, grid_size=1)
- expected = related_func(reduce_test_data[0], reduce_test_data[1], grid_size=1)
- assert_geometries_equal(actual, expected)
- @pytest.mark.parametrize("n", range(1, 3))
- @pytest.mark.parametrize("func, related_func", REDUCE_SET_OPERATIONS_PREC)
- def test_set_operation_prec_reduce_all_none(n, func, related_func):
- assert_geometries_equal(func([None] * n, grid_size=1), GeometryCollection([]))
- @pytest.mark.parametrize("n", range(1, 4))
- def test_coverage_union_reduce_1dim(n):
- """
- This is tested separately from other set operations as it expects only
- non-overlapping polygons
- """
- test_data = [
- shapely.box(0, 0, 1, 1),
- shapely.box(1, 0, 2, 1),
- shapely.box(2, 0, 3, 1),
- ]
- actual = shapely.coverage_union_all(test_data[:n])
- # perform the reduction in a python loop and compare
- expected = test_data[0]
- for i in range(1, n):
- expected = shapely.coverage_union(expected, test_data[i])
- assert_geometries_equal(actual, expected, normalize=True)
- def test_coverage_union_reduce_axis():
- # shape = (3, 2), all polygons - none of them overlapping
- data = [[shapely.box(i, j, i + 1, j + 1) for i in range(2)] for j in range(3)]
- actual = shapely.coverage_union_all(data, axis=None) # default
- assert isinstance(actual, Geometry)
- actual = shapely.coverage_union_all(data, axis=0)
- assert actual.shape == (2,)
- actual = shapely.coverage_union_all(data, axis=1)
- assert actual.shape == (3,)
- actual = shapely.coverage_union_all(data, axis=-1)
- assert actual.shape == (3,)
- def test_coverage_union_overlapping_inputs():
- polygon = Polygon([(1, 1), (1, 0), (0, 0), (0, 1), (1, 1)])
- other = Polygon([(1, 0), (0.9, 1), (2, 1), (2, 0), (1, 0)])
- if shapely.geos_version >= (3, 14, 0):
- # Overlapping polygons raise an error again
- with pytest.raises(shapely.GEOSException, match="TopologyException"):
- shapely.coverage_union(polygon, other)
- elif shapely.geos_version >= (3, 12, 0):
- # Return mostly unchanged output
- result = shapely.coverage_union(polygon, other)
- expected = shapely.multipolygons([polygon, other])
- assert_geometries_equal(result, expected, normalize=True)
- else:
- # Overlapping polygons raise an error
- with pytest.raises(
- shapely.GEOSException,
- match="CoverageUnion cannot process incorrectly noded inputs.",
- ):
- shapely.coverage_union(polygon, other)
- @pytest.mark.parametrize(
- "geom_1, geom_2",
- # All possible polygon, non_polygon combinations
- [[polygon, non_polygon] for non_polygon in non_polygon_types]
- # All possible non_polygon, non_polygon combinations
- + [
- [non_polygon_1, non_polygon_2]
- for non_polygon_1 in non_polygon_types
- for non_polygon_2 in non_polygon_types
- ],
- )
- def test_coverage_union_non_polygon_inputs(geom_1, geom_2):
- if shapely.geos_version >= (3, 12, 0):
- def effective_geom_types(geom):
- if hasattr(geom, "geoms") and not geom.is_empty:
- gts = set()
- for part in geom.geoms:
- gts |= effective_geom_types(part)
- return gts
- return {geom.geom_type.lstrip("Multi").replace("LinearRing", "LineString")}
- geom_types_1 = effective_geom_types(geom_1)
- geom_types_2 = effective_geom_types(geom_2)
- if len(geom_types_1) == 1 and geom_types_1 == geom_types_2:
- with ignore_invalid():
- # these show "invalid value encountered in coverage_union"
- result = shapely.coverage_union(geom_1, geom_2)
- assert geom_types_1 == effective_geom_types(result)
- else:
- with pytest.raises(
- shapely.GEOSException, match="Overlay input is mixed-dimension"
- ):
- shapely.coverage_union(geom_1, geom_2)
- else:
- # Non polygon geometries raise an error
- with pytest.raises(
- shapely.GEOSException, match="Unhandled geometry type in CoverageUnion."
- ):
- shapely.coverage_union(geom_1, geom_2)
- @pytest.mark.parametrize(
- "geom,grid_size,expected",
- [
- # floating point precision, expect no change
- (
- [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)],
- 0,
- Polygon(
- (
- (0, 0.2),
- (0, 10),
- (5.1, 10),
- (5.1, 0.2),
- (5, 0.2),
- (5, 0.1),
- (0.1, 0.1),
- (0.1, 0.2),
- (0, 0.2),
- )
- ),
- ),
- # grid_size is at effective precision, expect no change
- (
- [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)],
- 0.1,
- Polygon(
- (
- (0, 0.2),
- (0, 10),
- (5.1, 10),
- (5.1, 0.2),
- (5, 0.2),
- (5, 0.1),
- (0.1, 0.1),
- (0.1, 0.2),
- (0, 0.2),
- )
- ),
- ),
- # grid_size forces rounding to nearest integer
- (
- [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)],
- 1,
- Polygon([(0, 5), (0, 10), (5, 10), (5, 5), (5, 0), (0, 0), (0, 5)]),
- ),
- # grid_size much larger than effective precision causes rounding to nearest
- # multiple of 10
- (
- [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)],
- 10,
- Polygon([(0, 10), (10, 10), (10, 0), (0, 0), (0, 10)]),
- ),
- # grid_size is so large that polygons collapse to empty
- (
- [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)],
- 100,
- Polygon(),
- ),
- ],
- )
- def test_union_all_prec(geom, grid_size, expected):
- actual = shapely.union_all(geom, grid_size=grid_size)
- assert shapely.equals(actual, expected)
- def test_uary_union_alias():
- geoms = [shapely.box(0.1, 0.1, 5, 5), shapely.box(0, 0.2, 5.1, 10)]
- actual = shapely.unary_union(geoms, grid_size=1)
- expected = shapely.union_all(geoms, grid_size=1)
- assert shapely.equals(actual, expected)
- def test_difference_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `grid_size` for `difference` is deprecated"
- ):
- shapely.difference(point, point, None)
- def test_intersection_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `grid_size` for `intersection` is deprecated"
- ):
- shapely.intersection(point, point, None)
- def test_intersection_all_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `axis` for `intersection_all` is deprecated"
- ):
- shapely.intersection_all([point, point], None)
- def test_symmetric_difference_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `grid_size` for `symmetric_difference` is deprecated"
- ):
- shapely.symmetric_difference(point, point, None)
- def test_symmetric_difference_all_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `axis` for `symmetric_difference_all` is deprecated"
- ):
- shapely.symmetric_difference_all([point, point], None)
- def test_union_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `grid_size` for `union` is deprecated"
- ):
- shapely.union(point, point, None)
- def test_union_all_deprecate_positional():
- with pytest.deprecated_call(
- match="positional argument `grid_size` for `union_all` is deprecated"
- ):
- shapely.union_all([point, point], None)
- with pytest.deprecated_call(
- match="positional arguments `grid_size` and `axis` for `union_all` "
- "are deprecated"
- ):
- shapely.union_all([point, point], None, None)
- def test_coverage_union_all_deprecate_positional():
- data = [shapely.box(0, 0, 1, 1), shapely.box(1, 0, 2, 1)]
- with pytest.deprecated_call(
- match="positional argument `axis` for `coverage_union_all` is deprecated"
- ):
- shapely.coverage_union_all(data, None)
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